RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 CCDC12Q8WUD4 166 aaPredicted RBP2.53□□□□□ -2
RTTN-217ENST00000640393 CDKL2Q92772 493 aa2.53□□□□□ -2
RTTN-217ENST00000640393 CENPNQ96H22 339 aaPredicted RBP2.53□□□□□ -2
RTTN-217ENST00000640393 ZBED3Q96IU2 234 aaPredicted RBP2.53□□□□□ -2
RTTN-217ENST00000640393 FAM19A4Q96LR4 140 aa2.53□□□□□ -2
RTTN-217ENST00000640393 TM2D3Q9BRN9 247 aa2.53□□□□□ -2
RTTN-217ENST00000640393 NDEL1Q9GZM8 345 aa2.53□□□□□ -2
RTTN-217ENST00000640393 ARV1Q9H2C2 271 aa2.53□□□□□ -2
RTTN-217ENST00000640393 OR2S2Q9NQN1 319 aa2.53□□□□□ -2
RTTN-217ENST00000640393 MS4A12Q9NXJ0 267 aa2.53□□□□□ -2
RTTN-217ENST00000640393 UBAP1Q9NZ09 502 aa2.53□□□□□ -2
RTTN-217ENST00000640393 HMGXB4Q9UGU5 601 aa2.53□□□□□ -2
RTTN-217ENST00000640393 C15orf41Q9Y2V0 281 aa2.53□□□□□ -2
RTTN-217ENST00000640393 SLC22A7Q9Y694 548 aa2.53□□□□□ -2
RTTN-217ENST00000640393 UACAQ9BZF9 1416 aa2.53□□□□□ -2
RTTN-217ENST00000640393 TTC37Q6PGP7 1564 aa2.53□□□□□ -2
RTTN-217ENST00000640393 ARAP3Q8WWN8 1544 aa2.53□□□□□ -2
RTTN-217ENST00000640393 FANCAO15360 1455 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 C4orf51C9J302 202 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 RHOCP08134 193 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 SEC11BP0C7V7 166 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 PRSS3P35030 304 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 ARL2P36404 184 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 SPAM1P38567 509 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 SLC35B1P78383 322 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 STX3Q13277 289 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 PMS2P3Q13401 168 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 MAPRE2Q15555 327 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 VAMP3Q15836 100 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 USF2Q15853 346 aaPredicted RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 TAL2Q16559 108 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 FRMPD1Q5SYB0 1578 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 DUPD1Q68J44 220 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 ITPRIPQ8IWB1 547 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 DDI1Q8WTU0 396 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 PLA2G12AQ9BZM1 189 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 ARMC7Q9H6L4 198 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 VSIRQ9H7M9 311 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 VCX3AQ9NNX9 186 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 TAS2R1Q9NYW7 299 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 STX18Q9P2W9 335 aaKnown RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 CLEC2DQ9UHP7 191 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 MRM2Q9UI43 246 aaKnown RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 NXT1Q9UKK6 140 aaKnown RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 OR51B2Q9Y5P1 312 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 KDM5BQ9UGL1 1544 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 BRD4O60885 1362 aaPredicted RBP2.52□□□□□ -2.01
RTTN-217ENST00000640393 UHRF1BP1LA0JNW5 1464 aa2.52□□□□□ -2.01
RTTN-217ENST00000640393 TRAV8-6A0A0B4J262 113 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 IQCF5A8MTL0 148 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 DFFAO00273 331 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 CALUO43852 315 aaPredicted RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 UPK1BO75841 260 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 LCA5LO95447 670 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 BGNP21810 368 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 RANBP1P43487 201 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 ACOT2P49753 483 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 RGS6P49758 472 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 MAP3K7CLP57077 242 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 SLC35A1P78382 337 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 RPL18AQ02543 176 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 FMODQ06828 376 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 ZNF470Q6ECI4 717 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 THOC7Q6I9Y2 204 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 MORN3Q6PF18 240 aaPredicted RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 SPATA24Q86W54 205 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 CYB561A3Q8NBI2 242 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 CCDC124Q96CT7 223 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 MRPL48Q96GC5 212 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 ZNF75AQ96N20 296 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 TRNT1Q96Q11 434 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 MED10Q9BTT4 135 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 UPF3BQ9BZI7 483 aaKnown RBP2.51□□□□□ -2.01
RTTN-217ENST00000640393 DSN1Q9H410 356 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 DUSP21Q9H596 190 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 ASF1BQ9NVP2 202 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 ERICH3Q5RHP9 1530 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 CAMSAP1Q5T5Y3 1602 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 ELP1O95163 1332 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 SETBP1Q9Y6X0 1596 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 NCOA1Q15788 1441 aa2.51□□□□□ -2.01
RTTN-217ENST00000640393 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 SEC14L6B5MCN3 397 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 E7EWF7 191 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 IGHV1-46P01743 117 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 S100A6P06703 90 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 TACSTD2P09758 323 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 RD3LP0DJH9 198 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 ARR3P36575 388 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 KCNJ3P48549 501 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 HCCSP53701 268 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 SARNPP82979 210 aaKnown RBP2.5□□□□□ -2.01
RTTN-217ENST00000640393 ATP5G2Q06055 141 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 IFFO1Q0D2I5 559 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 COTL1Q14019 142 aa2.5□□□□□ -2.01
RTTN-217ENST00000640393 PSG3Q16557 428 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms