RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SARAFQ96BY9 339 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF2Q9BSG1 426 aaPredicted RBP12.99□□□□□ -0.33
TRIM3-215ENST00000639856 DECR2Q9NUI1 292 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 SDHAF2Q9NX18 166 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 IGF2RP11717 2491 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 FCGR3AP08637 254 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 PGAM2P15259 253 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 BEX5Q5H9J7 111 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 CALHM1Q8IU99 346 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 PDZD9Q8IXQ8 264 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF611Q8N823 705 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 C9orf106Q8NAJ2 232 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 GP6Q9HCN6 339 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 PRR13Q9NZ81 148 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 MFSD2BA6NFX1 497 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 KNG1P01042 644 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 ARR3P36575 388 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 TFAP2EQ6VUC0 442 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 OR1K1Q8NGR3 316 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 APOBEC3DQ96AK3 386 aaPredicted RBP12.98□□□□□ -0.33
TRIM3-215ENST00000639856 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
TRIM3-215ENST00000639856 MPTX1A8MV57 137 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 CRYZL1O95825 349 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 OR5H8P0DN80 308 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 OPRM1P35372 400 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 LUMP51884 338 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 RAB1AP62820 205 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 GUSBP1Q15486 140 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 DMRTA2Q96SC8 542 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PAPOLGQ9BWT3 736 aaKnown RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 SLC25A32Q9H2D1 315 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 GPR160Q9UJ42 338 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 INTS1Q8N201 2190 aaKnown RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PDCD6O75340 191 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 CTSDP07339 412 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PTGER4P35408 488 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 MALLQ13021 153 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 FAM209AQ5JX71 171 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF585AQ6P3V2 769 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 SLC25A26Q70HW3 274 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 MRPL21Q7Z2W9 205 aaKnown RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 LRRC20Q8TCA0 184 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 BCL2L2Q92843 193 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF471Q9BX82 626 aaPredicted RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 METTL8Q9H825 291 aaKnown RBP12.97□□□□□ -0.33
TRIM3-215ENST00000639856 PQLC2LA1A4F0 135 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 IFNA2P01563 188 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 PRDX4Q13162 271 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 DHRS11Q6UWP2 260 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 Q8NFD4 153 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 DYRK2Q92630 601 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 PHYHIPLQ96FC7 376 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 POM121L2Q96KW2 1035 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 MICU1Q9BPX6 476 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 LIME1Q9H400 295 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 GLRX2Q9NS18 164 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 RASL12Q9NYN1 266 aa12.96□□□□□ -0.33
TRIM3-215ENST00000639856 A0A1W2PR80 420 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 PLP2Q04941 152 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 FOXF2Q12947 444 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 RELL2Q8NC24 303 aaPredicted RBP12.95□□□□□ -0.34
TRIM3-215ENST00000639856 ABHD17AQ96GS6 310 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 OR10C1Q96KK4 312 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 C2orf50Q96LR7 162 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 ARPC5LQ9BPX5 153 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 C1QTNF6Q9BXI9 259 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 C1orf123Q9NWV4 160 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 TMA7Q9Y2S6 64 aaKnown RBP12.95□□□□□ -0.34
TRIM3-215ENST00000639856 H0YIZ8 118 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 CST4P01036 141 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 LYL1P12980 280 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 FUT3P21217 361 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 IGHV1-2P23083 117 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 PMELP40967 661 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 KIR2DL2P43627 348 aaPredicted RBP12.95□□□□□ -0.34
TRIM3-215ENST00000639856 NPBWR2P48146 333 aa12.95□□□□□ -0.34
TRIM3-215ENST00000639856 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
TRIM3-215ENST00000639856 SGPP2Q8IWX5 399 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms