RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PACRGQ96M98 296 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-213ENST00000638680 TMEM56Q96MV1 263 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 TMEM147Q9BVK8 224 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 PATE4P0C8F1 98 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 TMEM91Q6ZNR0 172 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 ADAD2Q8NCV1 583 aaKnown RBP16.38■□□□□ 0.21
SCARB2-213ENST00000638680 BLNKQ8WV28 456 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-213ENST00000638680 CA10Q9NS85 328 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 C7orf77A4D0Y5 90 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 DEFB109BQ30KR1 87 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 OR5H1A6NKK0 313 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 HRASP01112 189 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 RHOBP62745 196 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 PNRC1Q12796 327 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-213ENST00000638680 NUFIP2Q7Z417 695 aaKnown RBP16.38■□□□□ 0.21
SCARB2-213ENST00000638680 LYG1Q8N1E2 194 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 OR2M7Q8NG81 312 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 WDR13Q9H1Z4 485 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 AAMDCQ9H7C9 122 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 SLC2A8Q9NY64 477 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 PLA2G3Q9NZ20 509 aa16.38■□□□□ 0.21
SCARB2-213ENST00000638680 LRRC3CA6NJW4 275 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 C2CD4DB7Z1M9 353 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 GATCO43716 136 aaKnown RBP16.37■□□□□ 0.21
SCARB2-213ENST00000638680 CRYBA1P05813 215 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 FAM209AQ5JX71 171 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 OR5M9Q8NGP3 310 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 ANXA10Q9UJ72 324 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 NEU3Q9UQ49 428 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 TTC3P53804 2025 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 FGF2P09038 288 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SULT1A1P50225 295 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 PPP1CAP62136 330 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 LHX8Q68G74 356 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 NPAS1Q99742 590 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 MBPP02686 304 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SMIM6P0DI80 62 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 OR2T10Q8NGZ9 312 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SNX22Q96L94 193 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 RAB33BQ9H082 229 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 STARD10Q9Y365 291 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 M0R143 59 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 OR5AL1P0C617 328 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SCGB1C2P0DMR2 95 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SPNS3Q6ZMD2 512 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 FAM219AQ8IW50 185 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 C19orf57Q0VDD7 668 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 SURF2Q15527 256 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-213ENST00000638680 CEBPEQ15744 281 aa16.37■□□□□ 0.21
SCARB2-213ENST00000638680 CD160O95971 181 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 ATP6V1FQ16864 119 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 ZNF383Q8NA42 475 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 OR5D13Q8NGL4 314 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 TTRP02766 147 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 BTNL3Q6UXE8 466 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 OR11G2Q8NGC1 345 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 ZMAT5Q9UDW3 170 aaKnown RBP16.36■□□□□ 0.21
SCARB2-213ENST00000638680 SMIM17P0DL12 118 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 GLULP15104 373 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 C1QL3Q5VWW1 255 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 WDR73Q6P4I2 378 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 COX14Q96I36 57 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 DOK5Q9P104 306 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 LINC01387J3KSC0 135 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 NDUFB3O43676 98 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 LY86O95711 162 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 LSM11P83369 360 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCARB2-213ENST00000638680 CD226Q15762 336 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 LRRC10Q5BKY1 277 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 MRPL24Q96A35 216 aaKnown RBP16.36■□□□□ 0.21
SCARB2-213ENST00000638680 PLA2G2FQ9BZM2 168 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 TRAV8-7A0A075B6U6 113 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 CHST1O43916 411 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 HTR1DP28221 377 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 MPV17LQ2QL34 196 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 Q6ZN92 141 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 PRSS3P2Q8NHM4 247 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 MANBALQ9NQG1 85 aa16.36■□□□□ 0.21
SCARB2-213ENST00000638680 DOCK2Q92608 1830 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 RRP8O43159 456 aaKnown RBP16.35■□□□□ 0.21
SCARB2-213ENST00000638680 HLA-GP17693 338 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 GZMMP51124 257 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 ATG4DQ86TL0 474 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-213ENST00000638680 OR1L4Q8NGR5 311 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 A0A1B0GTQ1 180 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 TMIGD3P0DMS9 266 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-213ENST00000638680 CAMPP49913 170 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 SPCS3P61009 180 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 MIOXQ9UGB7 285 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 PRSS50Q9UI38 385 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 TRGV5A0A0B4J1U4 118 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 SRSF5Q13243 272 aaKnown RBP16.35■□□□□ 0.21
SCARB2-213ENST00000638680 TMEM97Q5BJF2 176 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 VWA1Q6PCB0 445 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 MRGPRDQ8TDS7 321 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 ANAPC16Q96DE5 110 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms