RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 A0A0J9YW62 118 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 GEMIN2O14893 280 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 SNRNP70P08621 437 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 TSPO2Q5TGU0 170 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 CCDC71LQ8N9Z2 235 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 NTNG2Q96CW9 530 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 EIF5A2Q9GZV4 153 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 CCDC187A0A096LP49 1063 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 NSG1A0A0A6YYJ2 146 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 A0A1W2PPE3 182 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 TNFSF11O14788 317 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 DNPH1O43598 174 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF205O95201 554 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 NRASP01111 189 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 IGHV2-5P01817 119 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 LCATP04180 440 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF14P17017 642 aaPredicted RBP17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 POLR2GP62487 172 aaKnown RBP eCLIP17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 FABP9Q0Z7S8 132 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 EXT1Q16394 746 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF774Q6NX45 483 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR5L1Q8NGL2 311 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 SPACA1Q9HBV2 294 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 NIT2Q9NQR4 276 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZDHHC8Q9ULC8 765 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 TMED3Q9Y3Q3 217 aa17.45■□□□□ 0.38
SYNGAP1-227ENST00000638142 A6NLC8 198 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 GJE1A6NN92 205 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 RAB5AP20339 215 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 LMO1P25800 156 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 PIGYQ3MUY2 71 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF100Q8IYN0 542 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR52M1Q8NGK5 317 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 HPSE2Q8WWQ2 592 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 DYRK2Q92630 601 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 MALSU1Q96EH3 234 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 IMMP1LQ96LU5 166 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 PBDC1Q9BVG4 233 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 IGKV1-12A0A0C4DH73 117 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 IGKV1D-12P01611 117 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 PRH1P02810 166 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 SSR4P51571 173 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR8B8Q15620 311 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 FBXL14Q8N1E6 418 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 JSRP1Q96MG2 331 aaPredicted RBP17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 IP6K3Q96PC2 410 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 SRXN1Q9BYN0 137 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR51M1Q9H341 326 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 SH2D2AQ9NP31 389 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 OCIAD1Q9NX40 245 aa17.44■□□□□ 0.38
SYNGAP1-227ENST00000638142 A0A1W2PPH5 198 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR6C6A6NF89 314 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 STARD6P59095 220 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 KRTAP27-1Q3LI81 207 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 LFNGQ8NES3 379 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 RSRP1Q9BUV0 290 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF700Q9H0M5 742 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 TMEM38BQ9NVV0 291 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 M0R036 132 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 PDCD6O75340 191 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 FGF5P12034 268 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 FHITP49789 147 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 ST3GAL6Q9Y274 331 aa17.43■□□□□ 0.38
SYNGAP1-227ENST00000638142 PHF1O43189 567 aaPredicted RBP17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 CBR3O75828 277 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 TCN2P20062 427 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 IGFBP4P22692 258 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 S100PP25815 95 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 FUT6P51993 359 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 RAC3P60763 192 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 HERV-K104P61576 105 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 MALLQ13021 153 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 GNMTQ14749 295 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 RHEBQ15382 184 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 FAM209BQ5JX69 171 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR4D5Q8NGN0 318 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 SNIP1Q8TAD8 396 aaKnown RBP17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 M1APQ8TC57 530 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 CPT1CQ8TCG5 803 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 CRLF2Q9HC73 371 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 RCL1Q9Y2P8 373 aaKnown RBP17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 FAM221AA4D161 298 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 G3V3Y1 287 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 COX6A1P12074 109 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 SRPXP78539 464 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 NHLH2Q02577 135 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 KRBOX4Q5JUW0 171 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 TMEM211Q6ICI0 200 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 BRICD5Q6PL45 260 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 LINC00469Q8N7U9 141 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 ISOC2Q96AB3 205 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 SLC35B3Q9H1N7 401 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 SH3BGRL3Q9H299 93 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 SLC7A11Q9UPY5 501 aa17.42■□□□□ 0.38
SYNGAP1-227ENST00000638142 KIAA1549Q9HCM3 1950 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 A0A1B0GW64 132 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 UMAD1C9J7I0 102 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 UMODP07911 640 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 ZNF32P17041 273 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 HTR5AP47898 357 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms