RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 LYSMD2Q8IV50 215 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ZFP62Q8NB50 900 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 MMP28Q9H239 520 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 WDR37Q9Y2I8 494 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 S1PR2O95136 353 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 BSGP35613 385 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 LYG2Q86SG7 212 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 MRGPRGQ86SM5 289 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 TP53I13Q8NBR0 393 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 DIMT1Q9UNQ2 313 aaKnown RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 CEP290O15078 2479 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 LEUTXA8MZ59 168 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 PRR33A8MZF0 331 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ADAP1O75689 374 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 SEMG1P04279 462 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ACSM4P0C7M7 580 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 FFAR4Q5NUL3 377 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 NCR3LG1Q68D85 454 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ELOVL5Q9NYP7 299 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 CCL27Q9Y4X3 112 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 NEURL1O76050 574 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 OR2C1O95371 312 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 C1orf220Q5T0J3 134 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 PMS2CLQ68D20 193 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM92Q6UXU6 159 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 LILRA3Q8N6C8 439 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 OR4A5Q8NH83 315 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 UQCC2Q9BRT2 126 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ATG101Q9BSB4 218 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 SFXN3Q9BWM7 321 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 CMC2Q9NRP2 79 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 METRNQ9UJH8 293 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 SLC22A13Q9Y226 551 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 UGT2A1Q9Y4X1 527 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 SPTBN1Q01082 2364 aaKnown RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 DOCK8Q8NF50 2099 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 FAM221AA4D161 298 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 C5orf67F2Z3F1 127 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 TFAP2AP05549 437 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 CCR2P41597 374 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 RPL31P62899 125 aaKnown RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF714Q96N38 554 aa5.45□□□□□ -1.54
SCN1A-217ENST00000637988 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-217ENST00000637988 KRBA1A5PL33 1030 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 C19orf67A6NJJ6 358 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF727A8MUV8 499 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TO15178 435 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM127O75204 238 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 OR2A4O95047 310 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF32P17041 273 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 GZMHP20718 246 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 HRH1P35367 487 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 DLX1P56177 255 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 MRPS11P82912 194 aaKnown RBP5.44□□□□□ -1.54
SCN1A-217ENST00000637988 CD226Q15762 336 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 CSRP2Q16527 193 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM215Q68D42 235 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF774Q6NX45 483 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM99Q8N816 258 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 LKAAEAR1Q8TD35 194 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 SNX22Q96L94 193 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 OR2A7Q96R45 310 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TEAD3Q99594 435 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 CABLES2Q9BTV7 478 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TRDV1A0A1B0GX56 115 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 J3KRW8 73 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 RGS13O14921 159 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 HAND1O96004 215 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 HTR1DP28221 377 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 P2RX3P56373 397 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 NKG7Q16617 165 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 SH2D5Q6ZV89 423 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 GTF2H5Q6ZYL4 71 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF547Q8IVP9 402 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM116Q8NCL8 245 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 PRSS3P2Q8NHM4 247 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 MRGPRDQ8TDS7 321 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF707Q96C28 371 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ANKRD60Q9BZ19 345 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 METTL17Q9H7H0 456 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-217ENST00000637988 CSAG2Q9Y5P2 127 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 A0A1B0GU03 582 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 MFSD2BA6NFX1 497 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 GAPDHP04406 335 aaKnown RBP5.44□□□□□ -1.54
SCN1A-217ENST00000637988 LIFP15018 202 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 EGR1P18146 543 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 CD1BP29016 333 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 SHC1P29353 583 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 MRPL58Q14197 206 aaKnown RBP5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ETFDHQ16134 617 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 MAMSTRQ6ZN01 415 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 C16orf82Q7Z2V1 217 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 NEURL2Q9BR09 285 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 PSME4Q14997 1843 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 ZNF815PA8K554 130 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 TMEM262E9PQX1 116 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 FZD6O60353 706 aa5.44□□□□□ -1.54
SCN1A-217ENST00000637988 PRSS2P07478 247 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms