RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF146Q15072 292 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 TMEM249Q2WGJ8 235 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SPIN3Q5JUX0 258 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 NLRC3Q7RTR2 1065 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SLC36A1Q7Z2H8 476 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 CD177Q8N6Q3 437 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SLC25A28Q96A46 364 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SDSLQ96GA7 329 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 MED30Q96HR3 178 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 TMUB1Q9BVT8 246 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SEBOXQ9HB31 216 aaPredicted RBP13.33□□□□□ -0.28
CLN6-216ENST00000636876 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 A0A1B0GW55 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 A0A1W2PP11 408 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 IFITM5A6NNB3 132 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 NOTOA8MTQ0 251 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 FAM157AC9JC47 383 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 AIPO00170 330 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 SIGLEC5O15389 551 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 BPNT1O95861 308 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 HAND1O96004 215 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L2P0CJ85 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L3P0CJ86 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L4P0CJ87 422 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L5P0CJ88 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L6P0CJ89 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L7P0CJ90 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUSP1P28562 367 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 RANBP1P43487 201 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 PITPNBP48739 271 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 CEBPDP49716 269 aaPredicted RBP13.32□□□□□ -0.28
CLN6-216ENST00000636876 VBP1P61758 197 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 NCS1P62166 190 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 IL13RA1P78552 427 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 MXD1Q05195 221 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 P2RY14Q15391 338 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 CTF1Q16619 201 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 NHLRC3Q5JS37 347 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 HES5Q5TA89 166 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4L9Q6RFH8 374 aaPredicted RBP13.32□□□□□ -0.28
CLN6-216ENST00000636876 ZNF841Q6ZN19 808 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
CLN6-216ENST00000636876 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 FAM216BQ8N7L0 139 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 OR51T1Q8NGJ9 327 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 C18orf12Q96KH6 178 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 DUX4Q9UBX2 424 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 STEAP1Q9UHE8 339 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 GLS2Q9UI32 602 aa13.32□□□□□ -0.28
CLN6-216ENST00000636876 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 GTF2F2P13984 249 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 SELLP14151 372 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 CD99P14209 185 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 GZMKP49863 264 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 CAPZA1P52907 286 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 CAV3P56539 151 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 CLDN12P56749 244 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
CLN6-216ENST00000636876 SEC61A1P61619 476 aaKnown RBP13.31□□□□□ -0.28
CLN6-216ENST00000636876 IL13RA2Q14627 380 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 PIGYQ3MUY2 71 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 TMEM104Q8NE00 496 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 MRPS24Q96EL2 167 aaKnown RBP13.31□□□□□ -0.28
CLN6-216ENST00000636876 CST11Q9H112 138 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 MAB21L2Q9Y586 359 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 DOCK11Q5JSL3 2073 aa13.31□□□□□ -0.28
CLN6-216ENST00000636876 A8MXK9 166 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 DVL1O14640 695 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 SH2D1BO14796 132 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 FCN3O75636 299 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 CRTAPO75718 401 aaPredicted RBP13.3□□□□□ -0.28
CLN6-216ENST00000636876 IL1AP01583 271 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 CHRM2P08172 466 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 INHBBP09529 407 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 VSIG8P0DPA2 414 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 FOSL1P15407 271 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 MGMTP16455 207 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 SERPINB10P48595 397 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 QRFPP83859 136 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 COL10A1Q03692 680 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 WDR25Q64LD2 544 aaPredicted RBP13.3□□□□□ -0.28
CLN6-216ENST00000636876 Q6P435 159 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 ZNF561Q8N587 486 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 OR51D1Q8NGF3 324 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 FAM3DQ96BQ1 224 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 SSBP3Q9BWW4 388 aaPredicted RBP13.3□□□□□ -0.28
CLN6-216ENST00000636876 KCNK15Q9H427 330 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 BANF2Q9H503 90 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 CLN8Q9UBY8 286 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 ST3GAL6Q9Y274 331 aa13.3□□□□□ -0.28
CLN6-216ENST00000636876 TMEM14DPA8MWL7 114 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 KIAA1324LA8MWY0 1029 aaPredicted RBP13.29□□□□□ -0.28
CLN6-216ENST00000636876 B4DSR2 109 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 PHF1O43189 567 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms