RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SMPD2O60906 423 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 IGKV3-15P01624 115 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CD80P33681 288 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OPRL1P41146 370 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 UBE2L3P68036 154 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SLC25A11Q02978 314 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF562Q6V9R5 426 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 LYG1Q8N1E2 194 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 GBGT1Q8N5D6 347 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF511Q8NB15 262 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 NEIL2Q969S2 332 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TMPRSS13Q9BYE2 586 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MBD1Q9UIS9 605 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MYO18BQ8IUG5 2567 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ACOD1A6NK06 481 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 KLF4O43474 513 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CRPP02741 224 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 IVDP26440 423 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 GNG3P63215 75 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OR2G6Q5TZ20 316 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OSTM1Q86WC4 334 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SIRT6Q8N6T7 355 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 RND1Q92730 232 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MBNL1Q9NR56 388 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ACER3Q9NUN7 267 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 HS3ST3A1Q9Y663 406 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SLC25A17O43808 307 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TNFSF15O95150 251 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MGMTP16455 207 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CCR5P51681 352 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 DUSP2Q05923 314 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CDC20Q12834 499 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SMAD2Q15796 467 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CFAP161Q6P656 301 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM81Q6P7N7 255 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM171Q8WVE6 324 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 C12orf42Q96LP6 360 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MRPL20Q9BYC9 149 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 S1PR5Q9H228 398 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 NTN4Q9HB63 628 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 HRH3Q9Y5N1 445 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 A0A1B0GU03 582 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CLDN2P57739 230 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 WIPI1Q5MNZ9 446 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OR4P4Q8NGL7 312 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OR52N5Q8NH56 324 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 RXFP4Q8TDU9 374 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 SLC39A13Q96H72 371 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OXGR1Q96P68 337 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 LRRC3BQ96PB8 259 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TMED3Q9Y3Q3 217 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 BCORL1Q5H9F3 1711 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 F8WEM9 126 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM250H0YL14 139 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 TNFSF11O14788 317 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 RBM11P57052 281 aaKnown RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 NXPH1P58417 271 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF415Q09FC8 603 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 DUSP5Q16690 384 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ADGRA1Q86SQ6 560 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 WFDC3Q8IUB2 231 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OR5A1Q8NGJ0 315 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 RGP1Q92546 391 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 PATJQ8NI35 1801 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 PLXNA1Q9UIW2 1896 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 H0YIG0 161 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 NPFFO15130 113 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ASIPP42127 132 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 DIO1P49895 249 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 PRSS53Q2L4Q9 553 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 OR5H6Q8NGV6 325 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 CCL17Q92583 94 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 RDH5Q92781 318 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF707Q96C28 371 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-212ENST00000636194 PBOV1Q9GZY1 135 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 DEFB127Q9H1M4 99 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 GLRX2Q9NS18 164 aa5.41□□□□□ -1.54
SCN1A-212ENST00000636194 MRC1P22897 1456 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 A0A1W2PQM1 296 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 SNRPBP14678 240 aaKnown RBP5.4□□□□□ -1.54
SCN1A-212ENST00000636194 GALNSP34059 522 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 PTGFRP43088 359 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 CLECL1Q8IZS7 167 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 MRPL30Q8TCC3 161 aaKnown RBP5.4□□□□□ -1.54
SCN1A-212ENST00000636194 DNASE2BQ8WZ79 361 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 MRGPRX4Q96LA9 322 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 MFRPQ9BY79 579 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 SMDT1Q9H4I9 107 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 RLFQ13129 1914 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 KRBA1A5PL33 1030 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM210A6NLX4 147 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 FAM106CPP0CH98 169 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 UCNP55089 124 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 BTG1P62324 171 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 CORO6Q6QEF8 472 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 GALNT16Q8N428 558 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 ADPRHL1Q8NDY3 354 aa5.4□□□□□ -1.54
SCN1A-212ENST00000636194 POM121Q96HA1 1249 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms