RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 STARD4Q96DR4 205 aa18.89■□□□□ 0.61
PNKP-220ENST00000627232 ZNF442Q9H7R0 627 aa18.89■□□□□ 0.61
PNKP-220ENST00000627232 TUBG2Q9NRH3 451 aa18.89■□□□□ 0.61
PNKP-220ENST00000627232 RCC2Q9P258 522 aaKnown RBP18.89■□□□□ 0.61
PNKP-220ENST00000627232 C14orf166Q9Y224 244 aaKnown RBP18.89■□□□□ 0.61
PNKP-220ENST00000627232 MKRN2OSH3BPM6 223 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 OPRM1P35372 400 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 IKZF1Q13422 519 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 SPATA46Q5T0L3 261 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 SEM1Q6ZVN7 128 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 MICU1Q9BPX6 476 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 ZNF2Q9BSG1 426 aaPredicted RBP18.88■□□□□ 0.61
PNKP-220ENST00000627232 RTL8AQ9BWD3 113 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 OR51I2Q9H344 312 aa18.88■□□□□ 0.61
PNKP-220ENST00000627232 OR5H8P0DN80 308 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 PGAM2P15259 253 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 CA6P23280 308 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 HTR2BP41595 481 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 UCP2P55851 309 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 SORDQ00796 357 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 IL13RA2Q14627 380 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 HAGHLQ6PII5 290 aaPredicted RBP18.87■□□□□ 0.61
PNKP-220ENST00000627232 UNQ6126/PRO20091Q6UXV3 157 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 Q6ZS49 121 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 BEND4Q6ZU67 534 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 ZNF610Q8N9Z0 462 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 ZNF680Q8NEM1 530 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 PDCD10Q9BUL8 212 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 DPCDQ9BVM2 203 aaPredicted RBP18.87■□□□□ 0.61
PNKP-220ENST00000627232 OR2J1Q9GZK6 312 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 ZNF71Q9NQZ8 489 aaPredicted RBP18.87■□□□□ 0.61
PNKP-220ENST00000627232 COMMD9Q9P000 198 aa18.87■□□□□ 0.61
PNKP-220ENST00000627232 FXYD6-FXYD2A0A087WZ82 144 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 TRAV14DV4A0A0A6YYC5 116 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 IQCF6A8MYZ5 107 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 J3QT63 122 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 SYNGR1O43759 233 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 MPC2O95563 127 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 IFNA7P01567 189 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 CTSDP07339 412 aaPredicted RBP18.86■□□□□ 0.61
PNKP-220ENST00000627232 RPA2P15927 270 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 TSC22D1Q15714 1073 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 KRTCAP3Q53RY4 240 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 TMEM65Q6PI78 240 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 BRICD5Q6PL45 260 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 CLEC18BQ6UXF7 455 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 CXorf67Q86X51 503 aaPredicted RBP18.86■□□□□ 0.61
PNKP-220ENST00000627232 COQ8AQ8NI60 647 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 SLC25A40Q8TBP6 338 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 DYRK2Q92630 601 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 EXTL1Q92935 676 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 FXYD6Q9H0Q3 95 aa18.86■□□□□ 0.61
PNKP-220ENST00000627232 MUC6Q6W4X9 2439 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 F8VVB4 439 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 F8VWA3 439 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 ARPC5O15511 151 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 SLC25A4P12235 298 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 GLRA1P23415 457 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 SUPT4H1P63272 117 aaKnown RBP18.85■□□□□ 0.61
PNKP-220ENST00000627232 BAMBIQ13145 260 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 PDCD1Q15116 288 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 PLEKHN1Q494U1 663 aaPredicted RBP18.85■□□□□ 0.61
PNKP-220ENST00000627232 C1orf185Q5T7R7 199 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 SLC22A25Q6T423 547 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 KCTD9Q7L273 389 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 FAM169BQ8N8A8 192 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 OR1J1Q8NGS3 322 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 SPACA1Q9HBV2 294 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 AMDHD2Q9Y303 409 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 GTF3C1Q12789 2109 aa18.85■□□□□ 0.61
PNKP-220ENST00000627232 LRP5LA4QPB2 252 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 K7EM74 188 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 CCSO14618 274 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 IGLV1-44P01699 117 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 GLAP06280 429 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 RPS2P15880 293 aaKnown RBP18.84■□□□□ 0.61
PNKP-220ENST00000627232 CALCRP30988 508 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 S100A11P31949 105 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 FOXC1Q12948 553 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 FAM76BQ5HYJ3 339 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 TMUB2Q71RG4 321 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 BHLHA15Q7RTS1 189 aaPredicted RBP18.84■□□□□ 0.61
PNKP-220ENST00000627232 GTF3AQ92664 365 aaKnown RBP18.84■□□□□ 0.61
PNKP-220ENST00000627232 CCDC120Q96HB5 630 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 OPN3Q9H1Y3 402 aaPredicted RBP18.84■□□□□ 0.61
PNKP-220ENST00000627232 RAB18Q9NP72 206 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 PRKACAP17612 351 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 PI3P19957 117 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 CYCSP99999 105 aaKnown RBP18.84■□□□□ 0.61
PNKP-220ENST00000627232 GSG1LQ6UXU4 331 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 C1orf174Q8IYL3 243 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 FAM58AQ8N1B3 248 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 BATF2Q8N1L9 274 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 IFT22Q9H7X7 185 aa18.84■□□□□ 0.61
PNKP-220ENST00000627232 RIF1Q5UIP0 2472 aaKnown RBP18.83■□□□□ 0.6
PNKP-220ENST00000627232 FAM186AA6NE01 2351 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 NOS1APO75052 506 aaPredicted RBP18.83■□□□□ 0.6
PNKP-220ENST00000627232 AGFG2O95081 481 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 NAPSAO96009 420 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 HOXD4P09016 255 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms