RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NUDCD2Q8WVJ2 157 aa10.09□□□□□ -0.79
LINC00538-201ENST00000626109 PIGTQ969N2 578 aa10.09□□□□□ -0.79
LINC00538-201ENST00000626109 PNPLA2Q96AD5 504 aa10.09□□□□□ -0.79
LINC00538-201ENST00000626109 KLK11Q9UBX7 282 aa10.09□□□□□ -0.79
LINC00538-201ENST00000626109 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
LINC00538-201ENST00000626109 ACACBO00763 2458 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 UBE2QL1A1L167 161 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 PPIAL4DF5H284 164 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 EIF1BO60739 113 aaKnown RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 IFNA5P01569 189 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 HPXP02790 462 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 F13BP05160 661 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 GIPP09681 153 aaPredicted RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 EIF1P41567 113 aaKnown RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 VEGFCP49767 419 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 FGF8P55075 233 aaPredicted RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM33P57088 247 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 RAP2BP61225 183 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 RPL15P61313 204 aaKnown RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 LTBQ06643 244 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 GRK1Q15835 563 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 CLLU1Q5K131 121 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 LRRTM1Q86UE6 522 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 ZFP62Q8NB50 900 aaPredicted RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 OR2G2Q8NGZ5 317 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 RGP1Q92546 391 aaPredicted RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 ERGIC1Q969X5 290 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 GNRHR2Q96P88 292 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 DPCDQ9BVM2 203 aaPredicted RBP10.08□□□□□ -0.8
LINC00538-201ENST00000626109 TTTY12Q9BZ98 90 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 BEX1Q9HBH7 125 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 DKKL1Q9UK85 242 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 FBXL2Q9UKC9 423 aa10.08□□□□□ -0.8
LINC00538-201ENST00000626109 TRAV36DV7A0A075B6V5 113 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TRBV5-7A0A0A0MS05 114 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 M0R233 179 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 GLSO94925 669 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 NDUFB6O95139 128 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ALOX5APP20292 161 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 GDF1P27539 372 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 RFC3P40938 356 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 SOX2P48431 317 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 DSCR4P56555 118 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 CLDN12P56749 244 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 UBE2KP61086 200 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 VAMP3Q15836 100 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 FAM180AQ6UWF9 173 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 MRPL21Q7Z2W9 205 aaKnown RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 MYPOPQ86VE0 399 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 FTMTQ8N4E7 242 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 WBP1Q96G27 269 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TSSK2Q96PF2 358 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 SOX7Q9BT81 388 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 HEXA-AS1Q9H8Q6 139 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 GLTPQ9NZD2 209 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 LRP12Q9Y561 859 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 OR4C45A6NMZ5 311 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 FAM166BA8MTA8 275 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 MAS1P04201 325 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 HEXAP06865 529 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 LINC00614P0C842 121 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 CFPP27918 469 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 SRD5A2P31213 254 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 LCN2P80188 198 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ROM1Q03395 351 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 SSBP1Q04837 148 aaKnown RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 RBMS2Q15434 407 aaKnown RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 PLEKHN1Q494U1 663 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 MRGPRDQ8TDS7 321 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 GPR119Q8TDV5 335 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM234Q8WY98 164 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ST8SIA2Q92186 375 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM106AQ96A25 262 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF703Q9H7S9 590 aaPredicted RBP10.07□□□□□ -0.8
LINC00538-201ENST00000626109 SLC17A5Q9NRA2 495 aa10.07□□□□□ -0.8
LINC00538-201ENST00000626109 TVP23AA6NH52 213 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 H7C417 338 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 NBR2O15453 112 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ACTL6AO96019 429 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 HLA-DQA2P01906 255 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 RFPL3SP0C7P2 107 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 GP1BBP13224 206 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 UQCRFS1P47985 274 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 NPBWR1P48145 328 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ZP1P60852 638 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 KLRB1Q12918 225 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
LINC00538-201ENST00000626109 LY6DQ14210 128 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 IL13RA2Q14627 380 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 TNXAQ16473 311 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 MESTQ5EB52 335 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF626Q68DY1 528 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms