RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CDX4O14627 284 aaPredicted RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 BET1O15155 118 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 IFNA21P01568 189 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 COX5BP10606 129 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 FUT3P21217 361 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 CCNOP22674 350 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 PIGPP57054 158 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TAGLNQ01995 201 aaKnown RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 ABCA11PQ4W5N1 156 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TMEM211Q6ICI0 200 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TFAP2EQ6VUC0 442 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 SLC25A26Q70HW3 274 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 OR1S2Q8NGQ3 325 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TOMM40LQ969M1 308 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 APH1AQ96BI3 265 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 MARS2Q96GW9 593 aaKnown RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 IP6K3Q96PC2 410 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 SLC5A7Q9GZV3 580 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 MS4A7Q9GZW8 240 aaPredicted RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 C12orf4Q9NQ89 552 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TMEM100Q9NV29 134 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 ASF1BQ9NVP2 202 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 PCDHB10Q9UN67 800 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 CACNA1GO43497 2377 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 PQLC2LA1A4F0 135 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM221AA4D161 298 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 RAB19A4D1S5 217 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 C5orf49A4QMS7 147 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 HLA-HP01893 362 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 APOC3P02656 99 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 GGNBP1Q5YKI7 109 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 OR56B2PQ8NGI1 322 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 PAPOLGQ9BWT3 736 aaKnown RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 LDAHQ9H6V9 325 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 ZNF442Q9H7R0 627 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 NAA60Q9H7X0 242 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 TUBD1Q9UJT1 453 aa7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 PTPRZ1P23471 2315 aaPredicted RBP7.18□□□□□ -1.26
SND1-IT1-201ENST00000623342 KMT2EQ8IZD2 1858 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A10PA6NDY2 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A18PA6NE21 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A16PA6NEW6 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A20PA6NIJ5 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A8PA6NJQ4 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A7PA6NKC0 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A22PA8MWA6 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A12PA8MX19 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A5PA8MXJ8 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A23PA8MXZ1 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 TAAR5O14804 337 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 OR7C1O76099 320 aaPredicted RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 SP1P08047 785 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A15PP0C7V4 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A13PP0C7W8 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A14PP0C7W9 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM90A24PP0C7X0 464 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 HKR1P10072 659 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 CD79AP11912 226 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FCGR2CP31995 323 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 ARR3P36575 388 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 NPBWR2P48146 333 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FOXG1P55316 489 aaPredicted RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FXYD4P59646 89 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 EIF5AP63241 154 aaKnown RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 PRDX4Q13162 271 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 SMCO1Q147U7 214 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 PDCD1Q15116 288 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 RNPS1Q15287 305 aaKnown RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 MRPL21Q7Z2W9 205 aaKnown RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FAM219AQ8IW50 185 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 FOXRED2Q8IWF2 684 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 Q8NFD4 153 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 BPIFCQ8NFQ6 507 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 TMED6Q8WW62 240 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 RTN4IP1Q8WWV3 396 aaPredicted RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 MRPL24Q96A35 216 aaKnown RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 APOBEC3DQ96AK3 386 aaPredicted RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 GALNT14Q96FL9 552 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 IL17BQ9UHF5 180 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 KLF13Q9Y2Y9 288 aaPredicted RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 STARD10Q9Y365 291 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 MAP1BP46821 2468 aaKnown RBP7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 KLRC4-KLRK1H3BQV0 150 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 NME2P1O60361 137 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 TNFSF15O95150 251 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 ZNF205O95201 554 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 CCL2P13500 99 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 NME2P22392 152 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 GLP1RP43220 463 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 MEOX1P50221 254 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 UCP3P55916 312 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 TMEM187Q14656 261 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 TMEM200AQ86VY9 491 aa7.17□□□□□ -1.26
SND1-IT1-201ENST00000623342 MCEMP1Q8IX19 187 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms