RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF611Q8N823 705 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 PIGCQ92535 297 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 DYRK2Q92630 601 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 MRPL24Q96A35 216 aaKnown RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 LRRC46Q96FV0 321 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 C18orf12Q96KH6 178 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 SUCNR1Q9BXA5 334 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 TTTY12Q9BZ98 90 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 MMP26Q9NRE1 261 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 STARD10Q9Y365 291 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 H7C1Q1 480 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 DNASE2O00115 360 aaPredicted RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 IFNA21P01568 189 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 CD59P13987 128 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 S100A10P60903 97 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 OR1C1Q15619 314 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 SLC22A25Q6T423 547 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 IL34Q6ZMJ4 242 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 TMEM200AQ86VY9 491 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 TUSC5Q8IXB3 177 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 RTN4IP1Q8WWV3 396 aaPredicted RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 ARL11Q969Q4 196 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 LOXL4Q96JB6 756 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 RSRP1Q9BUV0 290 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 FGF23Q9GZV9 251 aaPredicted RBP8.13□□□□□ -1.11
PDPN-212ENST00000621990 SLC2A9Q9NRM0 540 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 KCNIP3Q9Y2W7 256 aa8.13□□□□□ -1.11
PDPN-212ENST00000621990 TSPAN4O14817 238 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 ATG12O94817 140 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 IGHV3-9P01782 118 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 SP9P0CG40 484 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 FCGR2CP31995 323 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 EIF5AL1Q6IS14 154 aaKnown RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 BRICD5Q6PL45 260 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 SLC25A26Q70HW3 274 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 HPSE2Q8WWQ2 592 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 MSI2Q96DH6 328 aaKnown RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 PRRX2Q99811 253 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 RCC2Q9P258 522 aaKnown RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 ABI3Q9P2A4 366 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 AMDHD2Q9Y303 409 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 ZNF503-AS2A6NEH8 195 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 K7EPK0 472 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 CDK2AP1O14519 115 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 SYNGR4O95473 234 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 OR5AC1P0C628 307 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 ADCYAP1P18509 176 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 RPL12P30050 165 aaKnown RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 MAGEA5P43359 124 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 NPBWR2P48146 333 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 CEACAM21Q3KPI0 293 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 LIAT1Q6ZQX7 453 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 FAM219AQ8IW50 185 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 FAM71E2Q8N5Q1 922 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 OR56B2PQ8NGI1 322 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 OR4A4PQ8NGN8 299 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 APOBEC3DQ96AK3 386 aaPredicted RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 TAF9BQ9HBM6 251 aa8.12□□□□□ -1.11
PDPN-212ENST00000621990 CARHSP1Q9Y2V2 147 aaKnown RBP8.12□□□□□ -1.11
PDPN-212ENST00000621990 ABCD4O14678 606 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 NAPSAO96009 420 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 RFC3P40938 356 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 FGF12P61328 243 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 SRYQ05066 204 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 RNPS1Q15287 305 aaKnown RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 ABCA11PQ4W5N1 156 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 FREM1Q5H8C1 2179 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 OR2A2Q6IF42 318 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 MDS2Q8NDY4 140 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 TOMM40LQ969M1 308 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 ARV1Q9H2C2 271 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 ZNF705EA8MWA4 302 aaPredicted RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 SIGLEC5O15389 551 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 NME2P1O60361 137 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 JTBO76095 146 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 HLA-HP01893 362 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 NME2P22392 152 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 ARR3P36575 388 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 PJVKQ0ZLH3 352 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 PRDX4Q13162 271 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 SMCO1Q147U7 214 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 LDLRAD3Q86YD5 345 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 UBAC2Q8NBM4 344 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 GLYATL2Q8WU03 294 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 POM121L2Q96KW2 1035 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 PAPOLGQ9BWT3 736 aaKnown RBP8.11□□□□□ -1.11
PDPN-212ENST00000621990 PRRG4Q9BZD6 226 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 ZFP57Q9NU63 452 aa8.11□□□□□ -1.11
PDPN-212ENST00000621990 CRIM1Q9NZV1 1036 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms