RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 OPN4Q9UHM6 478 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 ZNF737O75373 536 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 CDRT1O95170 752 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 CYB5AP00167 134 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 PRKACAP17612 351 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 GATA3P23771 443 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 DUSP1P28562 367 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 CAV3P56539 151 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 PAX8Q06710 450 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 ELP2Q6IA86 826 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 ZNF561Q8N587 486 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 TSPAN14Q8NG11 270 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 OR4D6Q8NGJ1 314 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 OR10K1Q8NGX5 313 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 ST8SIA4Q92187 359 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 PHYHIPQ92561 330 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 MUL1Q969V5 352 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 CPNE2Q96FN4 548 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-217ENST00000621474 MED30Q96HR3 178 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 FAM192AQ9GZU8 254 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 ELL3Q9HB65 397 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-217ENST00000621474 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 TCF7L1Q9HCS4 588 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 SLC25A10Q9UBX3 287 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-217ENST00000621474 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
CBWD3-217ENST00000621474 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 KIR2DS1A0A191URI9 304 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 A0A1W2PP11 408 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 NDUFB3O43676 98 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 PSPNO60542 156 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 CRLF1O75462 422 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-217ENST00000621474 SNU13P55769 128 aaKnown RBP11.83□□□□□ -0.52
CBWD3-217ENST00000621474 FGF12P61328 243 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 COL10A1Q03692 680 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 SPIN3Q5JUX0 258 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 C17orf107Q6ZR85 190 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 CDH26Q8IXH8 852 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 NKAIN3Q8N8D7 197 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 SHARPINQ9H0F6 387 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 SEBOXQ9HB31 216 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-217ENST00000621474 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
CBWD3-217ENST00000621474 RPUSD1Q9UJJ7 312 aaKnown RBP11.83□□□□□ -0.52
CBWD3-217ENST00000621474 A0A087WXM4 84 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 TMEM82A0PJX8 343 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 HAND1O96004 215 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 SMIM18P0DKX4 95 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 CALRP27797 417 aaKnown RBP11.82□□□□□ -0.52
CBWD3-217ENST00000621474 C11orf91Q3C1V1 193 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 JAGN1Q8N5M9 183 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 OR51T1Q8NGJ9 327 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 C8orf46Q8TAG6 207 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
CBWD3-217ENST00000621474 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 ZNF581Q9P0T4 197 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 GSTK1Q9Y2Q3 226 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 J3QLI3 93 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 K7N7A8 449 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 GPR37O15354 613 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 TK1P04183 234 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 GALP22466 123 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 MTNR1BP49286 362 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 PIGYQ3MUY2 71 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 KIAA2026Q5HYC2 2103 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 CD276Q5ZPR3 534 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 Q6P435 159 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
CBWD3-217ENST00000621474 UQCC2Q9BRT2 126 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 CDC42EP3Q9UKI2 254 aa11.82□□□□□ -0.52
CBWD3-217ENST00000621474 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 MEGF11A6BM72 1044 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 ENSAO43768 121 aaKnown RBP11.81□□□□□ -0.52
CBWD3-217ENST00000621474 ARL6IP5O75915 188 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 OR2H2O95918 312 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 FSHBP01225 129 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 CHRM2P08172 466 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 MMP9P14780 707 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 LMO1P25800 156 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 PDCD1Q15116 288 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 RSU1Q15404 277 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 GLIPR1L1Q6UWM5 242 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 NR1H4Q96RI1 486 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-217ENST00000621474 FAM234AQ9H0X4 552 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 C19orf12Q9NSK7 152 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 ING4Q9UNL4 249 aa11.81□□□□□ -0.52
CBWD3-217ENST00000621474 MRPS28Q9Y2Q9 187 aaKnown RBP11.81□□□□□ -0.52
CBWD3-217ENST00000621474 ECDO95905 644 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-217ENST00000621474 NDUFB7P17568 137 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 SERPINA2P20848 420 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 FGF9P31371 208 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-217ENST00000621474 SLC22A6Q4U2R8 563 aa11.8□□□□□ -0.52
CBWD3-217ENST00000621474 NHLRC3Q5JS37 347 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms