RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 RPS14P62263 151 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 RPS15P62841 145 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 SUMO1P63165 101 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 RPL38P63173 70 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 ADAM8P78325 824 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 BTN3A2P78410 334 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 HLA-DRB3P79483 266 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 LCN2P80188 198 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 MRPS34P82930 218 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 B4GALNT1Q00973 533 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 HMGCS1Q01581 520 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF92Q03936 586 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 HSD52Q0P140 79 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 TMEM267Q0VDI3 215 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 TUSC3Q13454 348 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ATXN7L3Q14CW9 347 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 P2RY6Q15077 328 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 PCBP2Q15366 365 aaKnown RBP eCLIP3.06□□□□□ -1.92
SMC5-204ENST00000618375 RAB30Q15771 203 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 POU2AF1Q16633 256 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 UPP1Q16831 310 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 IAH1Q2TAA2 248 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 SLC25A35Q3KQZ1 300 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 TDRG1Q3Y452 100 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 DUSP28Q4G0W2 176 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 SPATA45Q537H7 98 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ACSM3Q53FZ2 586 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 PDLIM3Q53GG5 364 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 PHYHD1Q5SRE7 291 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 FAM102AQ5T9C2 384 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 FAM78BQ5VT40 261 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 LYPLAL1Q5VWZ2 237 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OLIG3Q7RTU3 272 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 PRSS45Q7RTY3 260 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 RTN4RL1Q86UN2 441 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 SLC25A42Q86VD7 318 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF280BQ86YH2 543 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 C10orf111Q8N326 155 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 TMEM229BQ8NBD8 167 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OR6T1Q8NGN1 323 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OR1B1Q8NGR6 318 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 NFKBIDQ8NI38 313 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 SLC25A40Q8TBP6 338 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 VN1R17PQ8TDU5 208 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF418Q8TF45 676 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 PTPMT1Q8WUK0 201 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 AQP3Q92482 292 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ESAMQ96AP7 390 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 COA7Q96BR5 231 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 S100A16Q96FQ6 103 aaKnown RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF681Q96N22 645 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 PGLYRP2Q96PD5 576 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 OR6C1Q96RD1 312 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF607Q96SK3 696 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 NPY6RQ99463 290 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ABHD6Q9BV23 337 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 NUDT9Q9BW91 350 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 SSBP3Q9BWW4 388 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 KRTAP3-1Q9BYR8 98 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 MAP1LC3BQ9GZQ8 125 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 SLC25A51Q9H1U9 297 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 MFSD1Q9H3U5 465 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 RERGLQ9H628 205 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ZNF703Q9H7S9 590 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 UBE2ZQ9H832 354 aaPredicted RBP3.06□□□□□ -1.92
SMC5-204ENST00000618375 PXMP2Q9NR77 195 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ANKRD10Q9NXR5 420 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 NUDT4Q9NZJ9 180 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 B4GALT6Q9UBX8 382 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 FBXL17Q9UF56 701 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 ERG28Q9UKR5 140 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 SLC7A7Q9UM01 511 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 FZD1Q9UP38 647 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 PPIAL4AQ9Y536 164 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 RFNGQ9Y644 331 aa3.06□□□□□ -1.92
SMC5-204ENST00000618375 MYLKQ15746 1914 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 PLXND1Q9Y4D7 1925 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 IGLV3-22A0A075B6J6 115 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.05□□□□□ -1.92
SMC5-204ENST00000618375 BORCS7-ASMTA0A0B4J1R7 106 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 CENPVL1A0A0U1RR11 272 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 A0A1W2PS29 197 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 PSMB11A5LHX3 300 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 RBFOX3A6NFN3 312 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 OR51F1A6NGY5 319 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 A6NIN4 97 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 OR4C45A6NMZ5 311 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 SMIM22K7EJ46 135 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 K7EP34 96 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 SIVA1O15304 175 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 ADAM20O43506 726 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 CD5LO43866 347 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 SCGB2A1O75556 95 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 TMEM50AO95807 157 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 NUDT3O95989 172 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 GASTP01350 101 aa3.05□□□□□ -1.92
SMC5-204ENST00000618375 HLA-AP01891 365 aaKnown RBP3.05□□□□□ -1.92
SMC5-204ENST00000618375 HLA-DRB1P01911 266 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms