RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZP1P60852 638 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 GPR176Q14439 515 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 CTF1Q16619 201 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 SMIM21Q3B7S5 101 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 HES5Q5TA89 166 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 GLIPR1L1Q6UWM5 242 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 PXT1Q8NFP0 134 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 ISOC1Q96CN7 298 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 DCSTAMPQ9H295 470 aa12.39□□□□□ -0.43
UBXN1-218ENST00000616865 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 SRRM5B3KS81 715 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 SLC17A2O00624 439 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 KDM4BO94953 1096 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 ZNF205O95201 554 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 HTR3BO95264 441 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 FSHBP01225 129 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 UBBP0CG47 229 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 BCL3P20749 454 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 GATA3P23771 443 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
UBXN1-218ENST00000616865 P2RY14Q15391 338 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 KCNJ8Q15842 424 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 PRR31Q5SQ13 230 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 C1orf100Q5SVJ3 147 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 CROCCP3Q8IVE0 287 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 DEFB108BQ8NET1 73 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
UBXN1-218ENST00000616865 DCAF16Q9NXF7 216 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 RASL12Q9NYN1 266 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 MTCH1Q9NZJ7 389 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 GHRLQ9UBU3 117 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 RSL24D1Q9UHA3 163 aaKnown RBP12.38□□□□□ -0.43
UBXN1-218ENST00000616865 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 DAPK2Q9UIK4 370 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 CEPT1Q9Y6K0 416 aa12.38□□□□□ -0.43
UBXN1-218ENST00000616865 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 DPPA5A6NC42 116 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 IFITM5A6NNB3 132 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 LGALS8O00214 317 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 NOS1APO75052 506 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 ZNF780AO75290 641 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 PRKACAP17612 351 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 SERPINA2P20848 420 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 RPS19P39019 145 aaKnown RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 BMXP51813 675 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 CAPZA1P52907 286 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 CAV3P56539 151 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 BTG1P62324 171 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 HNRNPA0Q13151 305 aaKnown RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 MICBQ29980 383 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 SLC22A6Q4U2R8 563 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 SFRP4Q6FHJ7 346 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-218ENST00000616865 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 C19orf18Q8NEA5 215 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 OR10K1Q8NGX5 313 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 NDNFQ8TB73 568 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 TBC1D15Q8TC07 691 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 GFI1Q99684 422 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 C7orf69Q9H7B7 122 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 RHOFQ9HBH0 211 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 GLS2Q9UI32 602 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 MGAM2Q2M2H8 2515 aa12.37□□□□□ -0.43
UBXN1-218ENST00000616865 IGHV3OR15-7A0A075B7D8 119 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 IGKV1-12A0A0C4DH73 117 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 OOEPA6NGQ2 149 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 H3BMQ9 156 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 AIPO00170 330 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 TMPRSS2O15393 492 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 CRTAPO75718 401 aaPredicted RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 BPNT1O95861 308 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 LHBP01229 141 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 IGKV1D-12P01611 117 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 CALCBP10092 127 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 ARSBP15848 533 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 MUC1P15941 1255 aaPredicted RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 SOX6P35712 828 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 NPBWR2P48146 333 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 SFXN4Q6P4A7 337 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
UBXN1-218ENST00000616865 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
UBXN1-218ENST00000616865 C22orf15Q8WYQ4 148 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms