RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MT-ATP6P00846 226 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 ISG15P05161 165 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 DBHP09172 617 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 ZNF728P0DKX0 622 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 IGFBP4P22692 258 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 PLA2G5P39877 138 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 RPL23AP62750 156 aaKnown RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 UBE2V2Q15819 145 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 H1FNTQ75WM6 255 aaPredicted RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 OR2AE1Q8NHA4 323 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 ASB10Q8WXI3 467 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 PTX4Q96A99 478 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 MRGPRX1Q96LB2 322 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 SLC46A1Q96NT5 459 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 TAAR9Q96RI9 348 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 LIME1Q9H400 295 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 KLRF1Q9NZS2 232 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 WNT16Q9UBV4 365 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 WDR25Q64LD2 544 aaPredicted RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 A0A1W2PQF6 199 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 HMGB3O15347 200 aaKnown RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 RRP8O43159 456 aaKnown RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 PNLIPP16233 465 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 ATP6V0CP27449 155 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 KIR2DL1P43626 348 aaPredicted RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 GABREP78334 506 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 HOXB13Q92826 284 aaPredicted RBP11.53□□□□□ -0.56
MSH6-214ENST00000616033 RNF24Q9Y225 148 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 PPIAL4AQ9Y536 164 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.56
MSH6-214ENST00000616033 TCRBV21S2A2A0A5A6 115 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 PGA3P0DJD8 388 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 FOXF1Q12946 379 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
MSH6-214ENST00000616033 ZNF160Q9HCG1 818 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 LHFPL6Q9Y693 200 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 WSB1Q9Y6I7 421 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 OR5H15A6NDH6 313 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 OR5H1A6NKK0 313 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 PAX6P26367 422 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 IL2RGP31785 369 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 GUCA1AP43080 201 aaPredicted RBP11.52□□□□□ -0.57
MSH6-214ENST00000616033 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.57
MSH6-214ENST00000616033 ELOBQ15370 118 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 MPV17LQ2QL34 196 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 MYPOPQ86VE0 399 aaPredicted RBP11.52□□□□□ -0.57
MSH6-214ENST00000616033 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 GAB2Q9UQC2 676 aa11.52□□□□□ -0.57
MSH6-214ENST00000616033 IGHV3-15A0A0B4J1V0 119 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 ST8SIA3O43173 380 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 TGOLN2O43493 480 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 FOLR1P15328 257 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 MTCP1P56278 107 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 MLF1P58340 268 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 VAMP2P63027 116 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 SLC22A25Q6T423 547 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 CA11O75493 328 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 FCARP24071 287 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 P2RY1P47900 373 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
MSH6-214ENST00000616033 METTL9Q9H1A3 318 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 LMAN1LQ9HAT1 526 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 AQP7O14520 342 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 DEFB133Q30KQ1 61 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 FAM69BQ5VUD6 431 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 LMX1AQ8TE12 382 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 SHDQ96IW2 340 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 SNHG12Q9BXW3 62 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 UCK1Q9HA47 277 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 PLEKHA2Q9HB19 425 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 SERINC1Q9NRX5 453 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 POMT1Q9Y6A1 747 aa11.51□□□□□ -0.57
MSH6-214ENST00000616033 A6NIZ1 184 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 GUSBP08236 651 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 CD33P20138 364 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 CFPP27918 469 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 RAP1BP61224 184 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 MRPS34P82930 218 aaKnown RBP11.5□□□□□ -0.57
MSH6-214ENST00000616033 IL15RAQ13261 267 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 IZUMO4Q1ZYL8 232 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 LHFPL1Q86WI0 220 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
MSH6-214ENST00000616033 FAM210BQ96KR6 192 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms