RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CDCA4Q9BXL8 241 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 KPTNQ9Y664 436 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 ANK2Q01484 3957 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 MEX3AA1L020 520 aaKnown RBP13.75□□□□□ -0.21
CBWD3-211ENST00000615061 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 ZNF737O75373 536 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 VHLP40337 213 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 HSPA13P48723 471 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 TAS2R43P59537 309 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 YIF1BQ5BJH7 314 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 USP43Q70EL4 1123 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 SATL1Q86VE3 508 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 Q8IYB0 196 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 FAM185AQ8N0U4 392 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 DUX5Q96PT3 197 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
CBWD3-211ENST00000615061 LSM2Q9Y333 95 aaKnown RBP13.75□□□□□ -0.21
CBWD3-211ENST00000615061 TMEM82A0PJX8 343 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 K7N7A8 449 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 KDM4BO94953 1096 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 HAND1O96004 215 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 TMEM225BP0DP42 221 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 CRHBPP24387 322 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 IRF3Q14653 427 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 Q499Y3 187 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 RNLSQ5VYX0 342 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 ZDHHC22Q8N966 263 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 C19orf24Q9BVV8 132 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 HMG20AQ9NP66 347 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 GSTK1Q9Y2Q3 226 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 RRP15Q9Y3B9 282 aaKnown RBP13.74□□□□□ -0.21
CBWD3-211ENST00000615061 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
CBWD3-211ENST00000615061 TRAV8-7A0A075B6U6 113 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 A0A0A6YYJ9 748 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 GABRPO00591 440 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 CHRM2P08172 466 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 RPL31P62899 125 aaKnown RBP13.73□□□□□ -0.21
CBWD3-211ENST00000615061 KLRD1Q13241 179 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 INSL4Q14641 139 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 C1orf147Q96MC9 270 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-211ENST00000615061 GPER1Q99527 375 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 TRBV23-1A0A0A0MS06 115 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 PSPNO60542 156 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 IGFBP3P17936 291 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-211ENST00000615061 OR3A4PP47883 348 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 ERVFRD-1P60508 538 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 ZNF273Q14593 569 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 ZNF146Q15072 292 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 SPHARQ15513 63 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 MED22Q15528 200 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 CMTM4Q8IZR5 234 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 KIR3DL3Q8N743 410 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-211ENST00000615061 OR10K1Q8NGX5 313 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 TNFAIP8L1Q8WVP5 186 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 TNFRSF14Q92956 283 aa13.73□□□□□ -0.21
CBWD3-211ENST00000615061 RNASEK-C17orf49H0YIS7 233 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 MAGEB3O15480 346 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 RGS10O43665 173 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 CCL3L1P16619 93 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 GABRR1P24046 479 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 PPP3R1P63098 170 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 PDCD1Q15116 288 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 DEFB112Q30KQ8 113 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 DDI2Q5TDH0 399 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 SAXO1Q8IYX7 474 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 DMRTB1Q96MA1 342 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 FAM234AQ9H0X4 552 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 TMEM138Q9NPI0 162 aa13.72□□□□□ -0.21
CBWD3-211ENST00000615061 TRBV5-7A0A0A0MS05 114 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 A0A1W2PRD5 423 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 A0A1W2PRF3 423 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 A0A1W2PRM7 423 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 SIRPB1O00241 398 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 PIN1P1O15428 100 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 CDRT1O95170 752 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 MAP2K4P45985 399 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 EDDM3BP56851 147 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 BDH1Q02338 343 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 ACSM1Q08AH1 577 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 FIP1L1Q6UN15 594 aaKnown RBP13.71□□□□□ -0.21
CBWD3-211ENST00000615061 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
CBWD3-211ENST00000615061 OR8H2Q8N162 312 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 PNKDQ8N490 385 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 ZSCAN4Q8NAM6 433 aaPredicted RBP13.71□□□□□ -0.21
CBWD3-211ENST00000615061 SNX22Q96L94 193 aa13.71□□□□□ -0.21
CBWD3-211ENST00000615061 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms