RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 KRTAP10-3P60369 221 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 IL24Q13007 206 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 DIAPH2-AS1Q14236 149 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TAF9Q16594 264 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 LTC4SQ16873 150 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TUSC1Q2TAM9 212 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 ATPAF1Q5TC12 328 aaPredicted RBP4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM244Q5VVB8 128 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 LIPKQ5VXJ0 399 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 Q6ZS46 218 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF573Q86YE8 665 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 NANOGP1Q8N7R0 232 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 OR4D6Q8NGJ1 314 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 PPP1R35Q8TAP8 253 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 FAM46BQ96A09 425 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 SMIM19Q96E16 107 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 Q96MT0 163 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 GFI1Q99684 422 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 BANF2Q9H503 90 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 DHDHQ9UQ10 334 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 H0YHG0 523 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 OGG1O15527 345 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 HAND1O96004 215 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 SNRPBP14678 240 aaKnown RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 GABRR1P24046 479 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 SAA4P35542 130 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 OR3A1P47881 315 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 CCR9P51686 369 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 FUT6P51993 359 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 GBX2P52951 348 aaPredicted RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 ACTA2P62736 377 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 RPS25P62851 125 aaKnown RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 RPL31P62899 125 aaKnown RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 UBA52P62987 128 aaKnown RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 ACTG2P63267 376 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 SLC35A2P78381 396 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 TMED1Q13445 227 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 MED22Q15528 200 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 KLHL22Q53GT1 634 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 STX19Q8N4C7 294 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 PARP16Q8N5Y8 322 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 PACRGLQ8N7B6 248 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 SDSLQ96GA7 329 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 COQ2Q96H96 371 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 CCDC90BQ9GZT6 254 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 NEK6Q9HC98 313 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 NOX4Q9NPH5 578 aa4.65□□□□□ -1.67
CPNE3-208ENST00000614678 CAB39Q9Y376 341 aaPredicted RBP4.65□□□□□ -1.67
CPNE3-208ENST00000614678 A0A1W2PPE3 182 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PLXNB1O43157 2135 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SULT1B1O43704 296 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ENSAO43768 121 aaKnown RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MPZL2O60487 215 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 CDK1P06493 297 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MDKP21741 143 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 TGFBR1P36897 503 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 HABP2Q14520 560 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 LY6EQ16553 131 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF529Q6P280 563 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 Q6P435 159 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SLC36A1Q7Z2H8 476 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 RFESDQ8TAC1 157 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 PLPPR1Q8TBJ4 325 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF184Q99676 751 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 RNF167Q9H6Y7 350 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SLC7A11Q9UPY5 501 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 A0A0B4J203 849 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 TRAV24A0A0B4J272 114 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MEIOCA2RUB1 952 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SH2D7A6NKC9 451 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 H0YAE9 185 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 K7N7A8 449 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 GEMIN2O14893 280 aaKnown RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SERPINA2P20848 420 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 CRHBPP24387 322 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 DLX6P56179 175 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 CLDN12P56749 244 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 BAMBIQ13145 260 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 LRRC10Q5BKY1 277 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 TMEM91Q6ZNR0 172 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 Q6ZPA2 131 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 FAM58AQ8N1B3 248 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 OR10Z1Q8NGY1 313 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ZNF671Q8TAW3 534 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 LPAR3Q9UBY5 353 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 IGHV1-69DA0A0B4J2H0 117 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 A0A0G2JK05 382 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 TMEM212A6NML5 194 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 NOS1APO75052 506 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 IFNA2P01563 188 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 IGHV1-69P01742 117 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 RPL22L1Q6P5R6 122 aaKnown RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 FIP1L1Q6UN15 594 aaKnown RBP4.64□□□□□ -1.67
CPNE3-208ENST00000614678 KCTD20Q7Z5Y7 419 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 SERPINA12Q8IW75 414 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 TNFAIP8L1Q8WVP5 186 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 MUL1Q969V5 352 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 ANKRD60Q9BZ19 345 aa4.64□□□□□ -1.67
CPNE3-208ENST00000614678 HMG20AQ9NP66 347 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms