RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF721Q8TF20 911 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 COPS7AQ9UBW8 275 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 PRODH2Q9UF12 536 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 PCSK5Q92824 1860 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 A0A0A6YYD4 124 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 H3BQ15 152 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 NKX2-8O15522 239 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 SOD3P08294 240 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 PTGER4P35408 488 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 ZNF93P35789 620 aaPredicted RBP19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 DNM1P34Q6PK57 102 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 RAB39BQ96DA2 213 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 GAL3ST4Q96RP7 486 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 NICN1Q9BSH3 213 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 GPR61Q9BZJ8 451 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 PARP12Q9H0J9 701 aaKnown RBP19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 C19orf25Q9UFG5 118 aaPredicted RBP19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 KCNIP3Q9Y2W7 256 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 MMP24Q9Y5R2 645 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 APC2O95996 2303 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 C11orf98E9PRG8 122 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 TAGLN2P37802 199 aaKnown RBP19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 SGPP2Q8IWX5 399 aa19.15■□□□□ 0.66
POLR2J3-220ENST00000613744 IGHV1-45A0A0A0MS14 117 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 TCAPO15273 167 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 CDC14BO60729 498 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 IGKV3-11P04433 115 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 CTSDP07339 412 aaPredicted RBP19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 CELA2AP08217 269 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 COX6A1P12074 109 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 UBE2KP61086 200 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 PCOLCEQ15113 449 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 GATSQ8NAP1 163 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 OR10AD1Q8NGE0 317 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 OR6X1Q8NH79 312 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 HPSE2Q8WWQ2 592 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 FOXN4Q96NZ1 517 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 URM1Q9BTM9 101 aaKnown RBP19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 ZNF160Q9HCG1 818 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 P4HTMQ9NXG6 502 aa19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 MRPS28Q9Y2Q9 187 aaKnown RBP19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 LSM5Q9Y4Y9 91 aaKnown RBP19.14■□□□□ 0.65
POLR2J3-220ENST00000613744 CDC14CA4D256 554 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 RBFOX3A6NFN3 312 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 B4DEV8 164 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 CA11O75493 328 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 IL33O95760 270 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 CXCL1P09341 107 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 FGF7P21781 194 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 CBLN3Q6UW01 205 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 C9orf40Q8IXQ3 194 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 CCDC54Q8NEL0 328 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 SLC26A10Q8NG04 563 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 OR1N1Q8NGS0 311 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 PTGES2Q9H7Z7 377 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 LOC102723996A0A087X1L8 192 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 DVL1O14640 695 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 SOCS1O15524 211 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 H2BFMP0C1H6 154 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 GLIPR1P48060 266 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 IL13RA2Q14627 380 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 ARL6IP1Q15041 203 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 PPA1Q15181 289 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 OTPQ5XKR4 325 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 GGNBP1Q5YKI7 109 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 RTL6Q6ICC9 239 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 TMEM156Q8N614 296 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 RNASEH2CQ8TDP1 164 aaKnown RBP19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 TVP23CQ96ET8 276 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 ADAT3Q96EY9 351 aaPredicted RBP19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 RCC1LQ96I51 464 aaKnown RBP19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 TMEM59Q9BXS4 323 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 WFDC1Q9HC57 220 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 FAM206AQ9NX38 181 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 EHFQ9NZC4 300 aa19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 COA3Q9Y2R0 106 aaPredicted RBP19.13■□□□□ 0.65
POLR2J3-220ENST00000613744 A6NIZ1 184 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 RRP8O43159 456 aaKnown RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 RAMP1O60894 148 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 MPIG6BO95866 241 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 IGHEP01854 428 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 TTRP02766 147 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 SFTPCP11686 197 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 TMEM50BP56557 158 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 RAP1BP61224 184 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 CSNK2A1P68400 391 aaPredicted RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 ARFRP1Q13795 201 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 GLIPR1L1Q6UWM5 242 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 SLC35E3Q7Z769 313 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 CSNK2A3Q8NEV1 391 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 RNF133Q8WVZ7 376 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 MISP3Q96FF7 219 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 C1orf147Q96MC9 270 aaPredicted RBP19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 NDUFAF3Q9BU61 184 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 KIAA1456Q9P272 454 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 CPAMD8Q8IZJ3 1885 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 NSG1A0A0A6YYJ2 146 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 SMCO3A2RU48 225 aa19.12■□□□□ 0.65
POLR2J3-220ENST00000613744 HSD17B6O14756 317 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms