RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 FABP5Q01469 135 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 PAX8Q06710 450 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 C11orf91Q3C1V1 193 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 HSD17B12Q53GQ0 312 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 FIP1L1Q6UN15 594 aaKnown RBP13.76□□□□□ -0.21
IRF1-211ENST00000613424 BTNL3Q6UXE8 466 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 C1orf229Q6ZS94 237 aaPredicted RBP13.76□□□□□ -0.21
IRF1-211ENST00000613424 CDH26Q8IXH8 852 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 ZNF561Q8N587 486 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 FAM192AQ9GZU8 254 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 SEBOXQ9HB31 216 aaPredicted RBP13.76□□□□□ -0.21
IRF1-211ENST00000613424 TCF7L1Q9HCS4 588 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 LPAR3Q9UBY5 353 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 OPN4Q9UHM6 478 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 ING4Q9UNL4 249 aa13.76□□□□□ -0.21
IRF1-211ENST00000613424 SETD2Q9BYW2 2564 aaPredicted RBP13.76□□□□□ -0.21
IRF1-211ENST00000613424 CDRT1O95170 752 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 NDUFB7P17568 137 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 ADRA2CP18825 462 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 HNF1AP20823 631 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 SNU13P55769 128 aaKnown RBP13.75□□□□□ -0.21
IRF1-211ENST00000613424 CAV3P56539 151 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 COL10A1Q03692 680 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 ZNF146Q15072 292 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 ELP2Q6IA86 826 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 LRRTM1Q86UE6 522 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 LYPD6Q86Y78 171 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 JAGN1Q8N5M9 183 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 PNLDC1Q8NA58 520 aaKnown RBP13.75□□□□□ -0.21
IRF1-211ENST00000613424 TMEM185AQ8NFB2 350 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 PHYHIPQ92561 330 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 CNTD2Q9H8S5 307 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 ELL3Q9HB65 397 aaPredicted RBP13.75□□□□□ -0.21
IRF1-211ENST00000613424 NDUFB11Q9NX14 153 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 RPUSD1Q9UJJ7 312 aaKnown RBP13.75□□□□□ -0.21
IRF1-211ENST00000613424 GSTK1Q9Y2Q3 226 aa13.75□□□□□ -0.21
IRF1-211ENST00000613424 MEGF11A6BM72 1044 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 CCRL2O00421 344 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 ENSAO43768 121 aaKnown RBP13.74□□□□□ -0.21
IRF1-211ENST00000613424 HAND1O96004 215 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 LIPFP07098 398 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 MTNR1BP49286 362 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 CAPZA1P52907 286 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 RSU1Q15404 277 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 SPIN3Q5JUX0 258 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 Q8NFD4 153 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 TSPAN14Q8NG11 270 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 OR10K1Q8NGX5 313 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 H1FXQ92522 213 aaKnown RBP13.74□□□□□ -0.21
IRF1-211ENST00000613424 DCTN5Q9BTE1 182 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 METTL9Q9H1A3 318 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 GLS2Q9UI32 602 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 AUP1Q9Y679 476 aa13.74□□□□□ -0.21
IRF1-211ENST00000613424 A0A087WXM4 84 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 K7N7A8 449 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 SH2D1BO14796 132 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 HTR3BO95264 441 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 TK1P04183 234 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
IRF1-211ENST00000613424 BMXP51813 675 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 FGF12P61328 243 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 NEDD8Q15843 81 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 SYT6Q5T7P8 510 aaPredicted RBP13.73□□□□□ -0.21
IRF1-211ENST00000613424 CD200R1LQ6Q8B3 271 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 MUL1Q969V5 352 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 SNX22Q96L94 193 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
IRF1-211ENST00000613424 S100A13Q99584 98 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 MRI1Q9BV20 369 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 FAM234AQ9H0X4 552 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 SLITRK2Q9H156 845 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 CUBNO60494 3623 aa13.73□□□□□ -0.21
IRF1-211ENST00000613424 NF1P21359 2839 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 TRDV1A0A1B0GX56 115 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 TMEM82A0PJX8 343 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 ZNF737O75373 536 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 ARL6IP5O75915 188 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 PPIAL4GP0DN37 164 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 SRP14P37108 136 aaKnown RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 GLT8D1Q68CQ7 371 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 GLIPR1L1Q6UWM5 242 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 C17orf107Q6ZR85 190 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 ASCC1Q8N9N2 400 aaKnown RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 OR51T1Q8NGJ9 327 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 C8orf46Q8TAG6 207 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 FOXRED1Q96CU9 486 aaPredicted RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 UQCC2Q9BRT2 126 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 EXOSC4Q9NPD3 245 aaKnown RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 IL36GQ9NZH8 169 aa13.72□□□□□ -0.21
IRF1-211ENST00000613424 MRPS28Q9Y2Q9 187 aaKnown RBP13.72□□□□□ -0.21
IRF1-211ENST00000613424 OR2H2O95918 312 aa13.71□□□□□ -0.21
IRF1-211ENST00000613424 CSTBP04080 98 aaKnown RBP13.71□□□□□ -0.21
IRF1-211ENST00000613424 CD37P11049 281 aa13.71□□□□□ -0.21
IRF1-211ENST00000613424 SRD5A1P18405 259 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms