RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PCDHB10Q9UN67 800 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 IGLV3-12A0A075B6K2 115 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 TUBAL3A6NHL2 446 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 IGHMP01871 453 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZNF92Q03936 586 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 OR14K1Q8NGZ2 314 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 C10orf35Q96D05 121 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 NGBQ9NPG2 151 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 SLC39A9Q9NUM3 307 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 PLXND1Q9Y4D7 1925 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 MPDZO75970 2070 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 A0A0U1RQV5 110 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 DFFBO76075 338 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ONECUT2O95948 504 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZNF83P51522 516 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 UBE2KP61086 200 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 PMP22Q01453 160 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZNF239Q16600 458 aaKnown RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 SNAI3Q3KNW1 292 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 FAHD2BQ6P2I3 314 aaPredicted RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 FAHD2AQ96GK7 314 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 NAA60Q9H7X0 242 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZNF107Q9UII5 783 aaPredicted RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 H2AFB1P0C5Y9 115 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ZNF250P15622 560 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 PPP1CBP62140 327 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 RGS7BPQ6MZT1 257 aaPredicted RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 TMEM88Q6PEY1 159 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 GCM1Q9NP62 436 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 SPTAN1Q13813 2472 aaKnown RBP11.48□□□□□ -0.57
TCF3-220ENST00000611869 A0A0U1RQK1 487 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 LRP5LA4QPB2 252 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 KLK2P20151 261 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 TESK1Q15569 626 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 ATP1A1-AS1Q5TC04 95 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 OR2A2Q6IF42 318 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
TCF3-220ENST00000611869 ZFP62Q8NB50 900 aaPredicted RBP11.48□□□□□ -0.57
TCF3-220ENST00000611869 MITD1Q8WV92 249 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
TCF3-220ENST00000611869 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 KCNAB3O43448 404 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 NPIPB7O75200 414 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 SP9P0CG40 484 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 SNCAP37840 140 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 PLGLAQ15195 96 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 OR2Z1Q8NG97 314 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 DECR2Q9NUI1 292 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 SPRY3O43610 288 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 ACTL6AO96019 429 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 NGFP01138 241 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 HBE1P02100 147 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 BCL3P20749 454 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 FAM185AQ8N0U4 392 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
TCF3-220ENST00000611869 NPIPB13A6NJU9 1138 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 NPIPB4C9JG80 1138 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 CXCL2P19875 107 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 PRAMEF6Q5VXH4 476 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 PIK3IP1Q96FE7 263 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 SLC26A1Q9H2B4 701 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 BMP5P22003 454 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 FOXC1Q12948 553 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 HAGHQ16775 308 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 OR10AD1Q8NGE0 317 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 STARD10Q9Y365 291 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 LEUTXA8MZ59 168 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 CDIPTO14735 213 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 KRASP01116 189 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 MPGP29372 298 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 F2RL1P55085 397 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 SMIM21Q3B7S5 101 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 LCN15Q6UWW0 184 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 C17orf78Q8N4C9 275 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 GALMQ96C23 342 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
TCF3-220ENST00000611869 FOXJ2Q9P0K8 574 aa11.47□□□□□ -0.57
TCF3-220ENST00000611869 OR5B21A6NL26 309 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ZNF891A8MT65 544 aaPredicted RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 NKX2-8O15522 239 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 RRP8O43159 456 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms