RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 JMJD8Q96S16 334 aa21.41■■□□□ 1.02
VEGFA-226ENST00000611736 MND1Q9BWT6 205 aa21.41■■□□□ 1.02
VEGFA-226ENST00000611736 ESM1Q9NQ30 184 aa21.41■■□□□ 1.02
VEGFA-226ENST00000611736 SIRT7Q9NRC8 400 aa21.41■■□□□ 1.02
VEGFA-226ENST00000611736 TPRKBQ9Y3C4 175 aa21.41■■□□□ 1.02
VEGFA-226ENST00000611736 TRBV5-5A0A0J9YX44 114 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 CHRM2P08172 466 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 CELP19835 753 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 VHLP40337 213 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 DLX1P56177 255 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 ZP1P60852 638 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 RPS11P62280 158 aaKnown RBP eCLIP21.4■■□□□ 1.02
VEGFA-226ENST00000611736 PPP3R1P63098 170 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 SLC35A2P78381 396 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 RNLSQ5VYX0 342 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 C9orf139Q6ZV77 190 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 Q8N7P7 452 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 OR52N4Q8NGI2 321 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 GPER1Q99527 375 aa21.4■■□□□ 1.02
VEGFA-226ENST00000611736 NKX3-1Q99801 234 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-226ENST00000611736 K7N7A8 449 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 KDM4BO94953 1096 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 RPL31P62899 125 aaKnown RBP21.39■■□□□ 1.01
VEGFA-226ENST00000611736 TUSC1Q2TAM9 212 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 Q499Y3 187 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 SAXO1Q8IYX7 474 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 CPNE2Q96FN4 548 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-226ENST00000611736 OR14A2Q96R54 314 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 CDCA4Q9BXL8 241 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 FAM234AQ9H0X4 552 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 HMG20AQ9NP66 347 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 GSTK1Q9Y2Q3 226 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 PCDHGB5Q9Y5G0 923 aa21.39■■□□□ 1.01
VEGFA-226ENST00000611736 IGHV1-69DA0A0B4J2H0 117 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 MDFIC2A0A1B0GVS7 189 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 ZNF737O75373 536 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 IGHV1-69P01742 117 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 ZDHHC22Q8N966 263 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 ZSCAN4Q8NAM6 433 aaPredicted RBP21.38■■□□□ 1.01
VEGFA-226ENST00000611736 OR5M11Q96RB7 305 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 FAM192AQ9GZU8 254 aa21.38■■□□□ 1.01
VEGFA-226ENST00000611736 TMEM82A0PJX8 343 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 M0R1W7 72 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 GABRPO00591 440 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 BPIFB3P59826 476 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 ZNF146Q15072 292 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 SPIN3Q5JUX0 258 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 TNFAIP8L1Q8WVP5 186 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 DUX5Q96PT3 197 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 DUSP21Q9H596 190 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 TMEM138Q9NPI0 162 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 GLS2Q9UI32 602 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 RAB26Q9ULW5 256 aa21.37■■□□□ 1.01
VEGFA-226ENST00000611736 A0A1W2PPK0 400 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 TRIM77I1YAP6 450 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 RGS10O43665 173 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 GABRR1P24046 479 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 BDKRB2P30411 391 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 BDH1Q02338 343 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 BAMBIQ13145 260 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 KLRD1Q13241 179 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 BLMHQ13867 455 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 IRF3Q14653 427 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 DEFB112Q30KQ8 113 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 DDI2Q5TDH0 399 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 TMEM200BQ69YZ2 307 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 GDPD3Q7L5L3 318 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 OR8H2Q8N162 312 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-226ENST00000611736 SNX22Q96L94 193 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 CHST6Q9GZX3 395 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 CKLFQ9UBR5 152 aa21.36■■□□□ 1.01
VEGFA-226ENST00000611736 LSM2Q9Y333 95 aaKnown RBP21.36■■□□□ 1.01
VEGFA-226ENST00000611736 DSCAML1Q8TD84 2053 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 SIRPB1O00241 398 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 ALDOBP05062 364 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 IGFBP3P17936 291 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-226ENST00000611736 CRHBPP24387 322 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 EDDM3BP56851 147 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 EDDM3AQ14507 147 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 SPHARQ15513 63 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 MED22Q15528 200 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 C17orf107Q6ZR85 190 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 C1orf122Q6ZSJ8 110 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 CCDC90BQ9GZT6 254 aa21.35■■□□□ 1.01
VEGFA-226ENST00000611736 METTL8Q9H825 291 aaKnown RBP21.35■■□□□ 1.01
VEGFA-226ENST00000611736 SEBOXQ9HB31 216 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-226ENST00000611736 EXOSC4Q9NPD3 245 aaKnown RBP21.35■■□□□ 1.01
VEGFA-226ENST00000611736 TRAV8-7A0A075B6U6 113 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 TRBV5-7A0A0A0MS05 114 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 A0A1W2PRD5 423 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 A0A1W2PRF3 423 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 A0A1W2PRM7 423 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 MEX3AA1L020 520 aaKnown RBP21.34■■□□□ 1.01
VEGFA-226ENST00000611736 DNAJC9-AS1A6NH13 148 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 RNASEK-C17orf49H0YIS7 233 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 SH2D1BO14796 132 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 CD1AP06126 327 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 OR3A4PP47883 348 aa21.34■■□□□ 1.01
VEGFA-226ENST00000611736 UBA52P62987 128 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms