RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ZNF671Q8TAW3 534 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 CEP19Q96LK0 163 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 GAFA1Q96PS6 74 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 OR8B2Q96RD0 313 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 NUDT16L1Q9BRJ7 211 aaKnown RBP7.15□□□□□ -1.26
SNCA-212ENST00000611107 ELL3Q9HB65 397 aaPredicted RBP7.15□□□□□ -1.26
SNCA-212ENST00000611107 TMEM138Q9NPI0 162 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 RBFOX1Q9NWB1 397 aaKnown RBP7.15□□□□□ -1.26
SNCA-212ENST00000611107 CKLFQ9UBR5 152 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 DNAJB11Q9UBS4 358 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 FOXJ3Q9UPW0 622 aa7.15□□□□□ -1.26
SNCA-212ENST00000611107 A0A087WXM4 84 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 TRAV40A0A0B4J280 105 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 SHISA3A0PJX4 238 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 OR2AT4A6NND4 320 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 DVL1O14640 695 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 KDM4BO94953 1096 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NXPH2O95156 264 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 MAS1P04201 325 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 ALDOBP05062 364 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 ACAA1P09110 424 aaPredicted RBP7.14□□□□□ -1.27
SNCA-212ENST00000611107 OCMP0CE72 109 aaPredicted RBP7.14□□□□□ -1.27
SNCA-212ENST00000611107 PSG2P11465 335 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 KCNJ8Q15842 424 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 DGUOKQ16854 277 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 HSD17B12Q53GQ0 312 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 ZNF788Q6ZQV5 615 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 CEACAM19Q7Z692 300 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 SAXO1Q8IYX7 474 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NKAIN3Q8N8D7 197 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NANPQ8TBE9 248 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 TNFAIP8L1Q8WVP5 186 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 PHYHIPQ92561 330 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 EMG1Q92979 244 aaKnown RBP7.14□□□□□ -1.27
SNCA-212ENST00000611107 TMIGD2Q96BF3 282 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 UPRTQ96BW1 309 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NR1H4Q96RI1 486 aaPredicted RBP7.14□□□□□ -1.27
SNCA-212ENST00000611107 GFI1Q99684 422 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 FAM192AQ9GZU8 254 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 SIRPDQ9H106 197 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NEK6Q9HC98 313 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 RASL12Q9NYN1 266 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 KAAG1Q9UBP8 84 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 CLN8Q9UBY8 286 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 OR5V1Q9UGF6 321 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 NUP50Q9UKX7 468 aa7.14□□□□□ -1.27
SNCA-212ENST00000611107 DNAJC9-AS1A6NH13 148 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 NKX6-3A6NJ46 265 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 SIGLEC5O15389 551 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CDRT1O95170 752 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CALCBP10092 127 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 GATA3P23771 443 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CALRP27797 417 aaKnown RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 ZNF93P35789 620 aaPredicted RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 UBA52P62987 128 aaKnown RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 IKZF1Q13422 519 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 DEFB112Q30KQ8 113 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 ATPAF1Q5TC12 328 aaPredicted RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 BTN2A1Q7KYR7 527 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 SATL1Q86VE3 508 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 PDZD9Q8IXQ8 264 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 MKXQ8IYA7 352 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 Q8IYB0 196 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 FAM58AQ8N1B3 248 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 PNKDQ8N490 385 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CD177Q8N6Q3 437 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 Q8N7P7 452 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 ZSCAN4Q8NAM6 433 aaPredicted RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 PXT1Q8NFP0 134 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 OR4D6Q8NGJ1 314 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 OR10K1Q8NGX5 313 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CPNE2Q96FN4 548 aaPredicted RBP7.13□□□□□ -1.27
SNCA-212ENST00000611107 SDSLQ96GA7 329 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 GPER1Q99527 375 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 DNTTIP1Q9H147 329 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 IL36GQ9NZH8 169 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 STUB1Q9UNE7 303 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 TRRAPQ9Y4A5 3859 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 FBN3Q75N90 2809 aa7.13□□□□□ -1.27
SNCA-212ENST00000611107 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 TRDV1A0A1B0GX56 115 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 A0A1W2PP11 408 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 RFPL4AA6NLU0 287 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 RFPL4AL1F8VTS6 287 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 MAGEB3O15480 346 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 NDUFA2O43678 99 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 ZNF737O75373 536 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 ARL6IP5O75915 188 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 KNG1P01042 644 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 TMEM225BP0DP42 221 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 JUNBP17275 347 aaPredicted RBP7.12□□□□□ -1.27
SNCA-212ENST00000611107 PRKACAP17612 351 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 GALP22466 123 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 CPT2P23786 658 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 GADD45AP24522 165 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 PTGFRP43088 359 aa7.12□□□□□ -1.27
SNCA-212ENST00000611107 SNU13P55769 128 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms