RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CD8AP01732 235 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 CST2P09228 141 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 LIMS3P0CW19 117 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 LIMS4P0CW20 117 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 OR5H8P0DN80 308 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 HIST1H1EP10412 219 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 UCHL3P15374 230 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ADORA1P30542 326 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 GPX4P36969 197 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 MAGEA12P43365 314 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 CRYBA4P53673 196 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TAS2R60P59551 318 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 RPL31P62899 125 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 PSPHP78330 225 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ARG2P78540 354 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 EIF4EBP1Q13541 118 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 SMCO1Q147U7 214 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 KIR2DS1Q14954 304 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TOMM34Q15785 309 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 OGFRL1Q5TC84 451 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 ARL9Q6T311 187 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 C3orf62Q6ZUJ4 267 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 FAM19A5Q7Z5A7 132 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 TMED4Q7Z7H5 227 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 LGI3Q8N145 548 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 GPR32P1Q8NGA4 272 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 OR6K6Q8NGW6 343 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 OR6K3Q8NGY3 331 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 HAVCR2Q8TDQ0 301 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 BORCS5Q969J3 196 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 PDXPQ96GD0 296 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TMEM56Q96MV1 263 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ZNF681Q96N22 645 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TSNAXQ99598 290 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 COPS4Q9BT78 406 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TMED9Q9BVK6 235 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 CDCA4Q9BXL8 241 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 DHX35Q9H5Z1 703 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 C11orf49Q9H6J7 331 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TMBIM4Q9HC24 238 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ABCB9Q9NP78 766 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 ARMC1Q9NVT9 282 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 LGALS13Q9UHV8 139 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 SLC22A7Q9Y694 548 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 TMEM56-RWDD3S4R434 201 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 CEP152O94986 1710 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 NID2Q14112 1375 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ZNFX1Q9P2E3 1918 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 TRAV8-7A0A075B6U6 113 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 IGHV5-10-1A0A0J9YXX1 117 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 LYRM9A8MSI8 78 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 M0QZK8 103 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 MPDU1O75352 247 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 TDP2O95551 362 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 KRT75O95678 551 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 HBE1P02100 147 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CATP04040 527 aaKnown RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 CALB1P05937 261 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 SCGB1A1P11684 91 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 GTF2F2P13984 249 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 GFAPP14136 432 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CSNK2A2P19784 350 aaPredicted RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 CELP19835 753 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 RND2P52198 227 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ZNF121P58317 390 aaPredicted RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 TAS2R31P59538 309 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 STXBP1P61764 594 aaKnown RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 CD164Q04900 197 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 PRKCDQ05655 676 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 RAB31Q13636 194 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 FAM53BQ14153 422 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 FLOT2Q14254 428 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 POU6F1Q14863 301 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 GUSBP1Q15486 140 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 RGNQ15493 299 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 OR7A5Q15622 319 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 LINC00483Q53H64 154 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 SPIN4Q56A73 249 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 OR10J3Q5JRS4 329 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 Q6ZR03 302 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 MBOAT2Q6ZWT7 520 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 SLC36A1Q7Z2H8 476 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 TMEM144Q7Z5S9 345 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 DPPA2Q7Z7J5 298 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 TMEM150AQ86TG1 271 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ZNF695Q8IW36 515 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CA13Q8N1Q1 262 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 CLDN22Q8N7P3 220 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ZFP41Q8N8Y5 198 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 UBALD1Q8TB05 177 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 FAM45AQ8TCE6 357 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ABHD3Q8WU67 409 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 KCTD7Q96MP8 289 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 GPR22Q99680 433 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 TIPINQ9BVW5 301 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ARL6Q9H0F7 186 aa2.57□□□□□ -2
SMCHD1-213ENST00000609587 ZNF430Q9H8G1 570 aaPredicted RBP2.57□□□□□ -2
SMCHD1-213ENST00000609587 RDH14Q9HBH5 336 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms