RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ATP6V0CP27449 155 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 TAGLN2P37802 199 aaKnown RBP19.43■□□□□ 0.7
SHANK2-220ENST00000608988 HAAOP46952 286 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 BAXQ07812 192 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 RSPO1Q2MKA7 263 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-220ENST00000608988 PHLDA2Q53GA4 152 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 SHISA6Q6ZSJ9 500 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 OR5L1Q8NGL2 311 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 TVP23CQ96ET8 276 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 RARRES2Q99969 163 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 PCDH15Q96QU1 1955 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 CCDC187A0A096LP49 1063 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 RPL36A-HNRNPH2H7BZ11 118 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 PHF1O43189 567 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-220ENST00000608988 CEACAM1P13688 526 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM176BQ3YBM2 270 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM211Q6ICI0 200 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 SLC22A25Q6T423 547 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 PFDN5Q99471 154 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 GPR173Q9NS66 373 aa19.43■□□□□ 0.7
SHANK2-220ENST00000608988 ARID1BQ8NFD5 2236 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-220ENST00000608988 METTL12A8MUP2 240 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 RAMP1O60894 148 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 PNLIPP16233 465 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 OPRM1P35372 400 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 RRADP55042 308 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 FXYD4P59646 89 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 RND3P61587 244 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 TAF9Q16594 264 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 WDR74Q6RFH5 385 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-220ENST00000608988 SLC35G3Q8N808 338 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 SGK3Q96BR1 496 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM56Q96MV1 263 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 PCED1AQ9H1Q7 454 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 LYRM2Q9NU23 88 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-220ENST00000608988 DOK5Q9P104 306 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF391Q9UJN7 358 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM56-RWDD3S4R434 201 aa19.42■□□□□ 0.7
SHANK2-220ENST00000608988 DHHO43323 396 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 ITGA3P26006 1051 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 NKX2-1P43699 371 aaPredicted RBP19.41■□□□□ 0.7
SHANK2-220ENST00000608988 SSTP61278 116 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 H3F3AP84243 136 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 ELOBQ15370 118 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 SYT13Q7L8C5 426 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 OR10G3Q8NGC4 313 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 NKX2-4Q9H2Z4 354 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 MYOTQ9UBF9 498 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 MTCH2Q9Y6C9 303 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 IFITM10A6NMD0 228 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 YIF1AO95070 293 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 SCAF4O95104 1147 aaKnown RBP19.41■□□□□ 0.7
SHANK2-220ENST00000608988 GLIPR1P48060 266 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 RBP2P50120 134 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 NDUFA6P56556 154 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 EXT1Q16394 746 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF674Q2M3X9 581 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 PYY3Q5JQD4 70 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF429Q86V71 674 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 OSR2Q8N2R0 312 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 NIPSNAP3BQ9BS92 247 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM222Q9H0R3 208 aa19.41■□□□□ 0.7
SHANK2-220ENST00000608988 C3orf85A0A1B0GTC6 90 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 CLEC18AA5D8T8 446 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 SHISA7A6NL88 538 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 BCAT2O15382 392 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-220ENST00000608988 MPPED1O15442 326 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 DEFA6Q01524 100 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 TLE4Q04727 773 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 RAB35Q15286 201 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 KHDC3LQ587J8 217 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 TSPO2Q5TGU0 170 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 CLEC18CQ8NCF0 446 aa19.4■□□□□ 0.7
SHANK2-220ENST00000608988 WDR77Q9BQA1 342 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-220ENST00000608988 TRBV23-1A0A0A0MS06 115 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 IGSF23A1L1A6 192 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 PDCD6O75340 191 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 OPN1LWP04000 364 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 CRYGSP22914 178 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 NXPH1P58417 271 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 VAMP2P63027 116 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 ICAM4Q14773 271 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 SRSF7Q16629 238 aaKnown RBP eCLIP19.39■□□□□ 0.7
SHANK2-220ENST00000608988 DMRTC1Q5HYR2 192 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 FAM69BQ5VUD6 431 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 Q6ZS49 121 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 ZNF100Q8IYN0 542 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 TMEM123Q8N131 208 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 Q8WTZ3 238 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 BORCS8Q96FH0 119 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 FAM86C1Q9NVL1 165 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 GFOD1Q9NXC2 390 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 PLEK2Q9NYT0 353 aa19.39■□□□□ 0.7
SHANK2-220ENST00000608988 TRAV1-1A0A0B4J248 108 aa19.39■□□□□ 0.69
SHANK2-220ENST00000608988 FAM24AA6NFZ4 105 aa19.39■□□□□ 0.69
SHANK2-220ENST00000608988 ZNF587BE7ETH6 402 aa19.39■□□□□ 0.69
SHANK2-220ENST00000608988 GPR37O15354 613 aa19.39■□□□□ 0.69
SHANK2-220ENST00000608988 TOX3O15405 576 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-220ENST00000608988 GLB1P16278 677 aa19.39■□□□□ 0.69
SHANK2-220ENST00000608988 RGS19P49795 217 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms