RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NAA60Q9H7X0 242 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 BCO1Q9HAY6 547 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 AK3Q9UIJ7 227 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 FOXD3Q9UJU5 478 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF850A8MQ14 1090 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 HOXA6P31267 233 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SULT1A1P50225 295 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 PKIAP61925 76 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 MRPS34P82930 218 aaKnown RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 TMEM187Q14656 261 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 CNN3Q15417 329 aaKnown RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SNAI3Q3KNW1 292 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SECTM1Q8WVN6 248 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 CCDC74BQ96LY2 380 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SUCNR1Q9BXA5 334 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 ANGPTL4Q9BY76 406 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 BORCS7-ASMTA0A0B4J1R7 106 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 IFITM10A6NMD0 228 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 MSTNO14793 375 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 TSPAN15O95858 294 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 MBPP02686 304 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-219ENST00000608720 OR8U9P0C7N5 309 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 SEC11BP0C7V7 166 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 CEACAM6P40199 344 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 CHAF1BQ13112 559 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 TAF9Q16594 264 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 GPR157Q5UAW9 335 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 HEPN1Q6WQI6 88 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 SPEM1Q8N4L4 309 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 LRTM2Q8N967 370 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 OR8U1Q8NH10 309 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 MAFAQ8NHW3 353 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-219ENST00000608720 ISOC2Q96AB3 205 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 IP6K3Q96PC2 410 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 UCN2Q96RP3 112 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 NXT1Q9UKK6 140 aaKnown RBP12.75□□□□□ -0.37
CTCFL-219ENST00000608720 ADAMTS20P59510 1910 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 ABCA7Q8IZY2 2146 aa12.75□□□□□ -0.37
CTCFL-219ENST00000608720 NCOR1O75376 2440 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 FAM230AA0A1W2PPH8 454 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 SEC14L6B5MCN3 397 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ANGPTL7O43827 346 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 GPR137BO60478 399 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 LY86O95711 162 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 LIFP15018 202 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 CRYGSP22914 178 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 AKR1C3P42330 323 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 RRADP55042 308 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 RAB35Q15286 201 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 SSX2Q16385 188 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ZIC4Q8N9L1 334 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-219ENST00000608720 TOMM40LQ969M1 308 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 LIME1Q9H400 295 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 WDR54Q9H977 334 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 FRYLO94915 3013 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 H7C1Q1 480 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ZIC3O60481 467 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 F10P00742 488 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 OPRM1P35372 400 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 SNCAP37840 140 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ID4P47928 161 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 OR2B8PP59922 312 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 KIAA0141Q14154 515 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-219ENST00000608720 AKIRIN2Q53H80 203 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 LHFPL2Q6ZUX7 228 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 ERGIC1Q969X5 290 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 MARS2Q96GW9 593 aaKnown RBP12.74□□□□□ -0.37
CTCFL-219ENST00000608720 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 GNRHR2Q96P88 292 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 AKIRIN1Q9H9L7 192 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-219ENST00000608720 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
CTCFL-219ENST00000608720 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 SPRY1O43609 319 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 DANCRP0C864 163 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 CHATP28329 748 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 DDTP30046 118 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 SP6Q3SY56 376 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 NEU1Q99519 415 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 SYT3Q9BQG1 590 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 GINS3Q9BRX5 216 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 FAM86C1Q9NVL1 165 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms