RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTSA-216ENST00000607212 KRT84Q9NSB2 600 aa11.95□□□□□ -0.5
CTSA-216ENST00000607212 CLN6Q9NWW5 311 aa11.95□□□□□ -0.5
CTSA-216ENST00000607212 ADARB2-AS1A8MUL3 147 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 ZNF737O75373 536 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 SRSF10O75494 262 aaKnown RBP11.94□□□□□ -0.5
CTSA-216ENST00000607212 OCM2P0CE71 109 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 OCMP0CE72 109 aaPredicted RBP11.94□□□□□ -0.5
CTSA-216ENST00000607212 CALCBP10092 127 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 DUSP1P28562 367 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 ATP6V1E1P36543 226 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 FUT6P51993 359 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 SLC35A2P78381 396 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 ENTHD1Q8IYW4 607 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 OR4X2Q8NGF9 303 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 WNT10AQ9GZT5 417 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 TMEM133Q9H2Q1 129 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 ADGRL4Q9HBW9 690 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 MTCH1Q9NZJ7 389 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 MRM2Q9UI43 246 aaKnown RBP11.94□□□□□ -0.5
CTSA-216ENST00000607212 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
CTSA-216ENST00000607212 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 F8VVB4 439 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 F8VWA3 439 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 SIRPB1O00241 398 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 IGHA1P01876 353 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 PRKACAP17612 351 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 CD24P25063 80 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 BRS3P32247 399 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 DYNLT3P51808 116 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 ATP1B3P54709 279 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 FAM220AQ7Z4H9 259 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 GID4Q8IVV7 300 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 Q8IYB0 196 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 ING3Q9NXR8 418 aa11.93□□□□□ -0.5
CTSA-216ENST00000607212 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
CTSA-216ENST00000607212 GYG2O15488 501 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 APOL3O95236 402 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 LPLP06858 475 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 T-ENOLP0DO92 83 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 DAPP51397 102 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 PRAMEF5Q5TYX0 476 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 TCF23Q7RTU1 214 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 C16orf82Q7Z2V1 217 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 FAM58AQ8N1B3 248 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 DPF1Q92782 380 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 SLC25A33Q9BSK2 321 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 GAL3ST2Q9H3Q3 398 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
CTSA-216ENST00000607212 IL36RNQ9UBH0 155 aa11.92□□□□□ -0.5
CTSA-216ENST00000607212 IGKV1-27A0A075B6S5 117 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 TRGV10A0A0A0MS01 117 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 METTL15A6NJ78 407 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 SH2D7A6NKC9 451 aaPredicted RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 TOR1AO14656 332 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 MGST3O14880 152 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 MITFO75030 526 aaPredicted RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 ZNF20P17024 532 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 BCL3P20749 454 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 CCL1P22362 96 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 CD83Q01151 205 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 SCN1BQ07699 218 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 OR52W1Q6IF63 320 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 SSX6Q7RTT6 188 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 CATSPERDQ86XM0 798 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 ABHD12Q8N2K0 398 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 OR52N4Q8NGI2 321 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 NRBF2Q96F24 287 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 OCSTAMPQ9BR26 566 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 CHST5Q9GZS9 411 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 NEK6Q9HC98 313 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 EXOSC4Q9NPD3 245 aaKnown RBP11.91□□□□□ -0.5
CTSA-216ENST00000607212 DPM3Q9P2X0 92 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 GSTK1Q9Y2Q3 226 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 PCDHGB5Q9Y5G0 923 aa11.91□□□□□ -0.5
CTSA-216ENST00000607212 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 RBP2P50120 134 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 MTCP1P56278 107 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 P2RX3P56373 397 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms