RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 FBXW9Q5XUX1 488 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 TMEM42Q69YG0 159 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 OR5AC2Q9NZP5 309 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 ZGRF1Q86YA3 2104 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 CDRT15L2A8MXV6 281 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 H0YIZ8 118 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 IL2RAP01589 272 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 TFF1P04155 84 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 FPR2P25090 351 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 ZDHHC23Q8IYP9 409 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
CTSA-214ENST00000606788 OR2J1Q9GZK6 312 aa13.66□□□□□ -0.22
CTSA-214ENST00000606788 RNF222A6NCQ9 220 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 SFT2D2O95562 160 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 NAT1P18440 290 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 ARHGDIBP52566 201 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 RBM11P57052 281 aaKnown RBP13.65□□□□□ -0.22
CTSA-214ENST00000606788 PIGPP57054 158 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 APOBEC3DQ96AK3 386 aaPredicted RBP13.65□□□□□ -0.22
CTSA-214ENST00000606788 HIST1H2AAQ96QV6 131 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 HMSDA8MTL9 139 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 P2RX3P56373 397 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 DHODHQ02127 395 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 RAB32Q13637 225 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 MPPED2Q15777 294 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 KRTAP27-1Q3LI81 207 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 NHLRC3Q5JS37 347 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 ELP2Q6IA86 826 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 MEX3BQ6ZN04 569 aaKnown RBP13.65□□□□□ -0.22
CTSA-214ENST00000606788 OR1K1Q8NGR3 316 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 ATRXP46100 2492 aa13.65□□□□□ -0.22
CTSA-214ENST00000606788 KANTRA0A1W2PQU2 76 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 NXPH3O95157 252 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 TBPP20226 339 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 CBX5P45973 191 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 TCF15Q12870 199 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.23
CTSA-214ENST00000606788 EXTL1Q92935 676 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 C10orf35Q96D05 121 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 ZC4H2Q9NQZ6 224 aa13.65□□□□□ -0.23
CTSA-214ENST00000606788 ACTL6AO96019 429 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 NMBP08949 121 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 NSUN5P2Q63ZY6 315 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 LHFPL1Q86WI0 220 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 INO80EQ8NBZ0 244 aaPredicted RBP13.64□□□□□ -0.23
CTSA-214ENST00000606788 SMIM3Q9BZL3 60 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 ZNF724A8MTY0 619 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 K7EM74 188 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 CRHP06850 196 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 C4BPBP20851 252 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 IGHV1-2P23083 117 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 PSMB6P28072 239 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 MPGP29372 298 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 CALCRP30988 508 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 SPIN3Q5JUX0 258 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 COLCA1Q6ZS62 124 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 ST8SIA2Q92186 375 aa13.64□□□□□ -0.23
CTSA-214ENST00000606788 MRPL24Q96A35 216 aaKnown RBP13.64□□□□□ -0.23
CTSA-214ENST00000606788 NUDT16L1Q9BRJ7 211 aaKnown RBP13.64□□□□□ -0.23
CTSA-214ENST00000606788 TM4SF5O14894 197 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 PDCD6O75340 191 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 SCTP09683 121 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 UBE2NP61088 152 aaKnown RBP13.63□□□□□ -0.23
CTSA-214ENST00000606788 ACTBL2Q562R1 376 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 ESRP2Q9H6T0 727 aaKnown RBP13.63□□□□□ -0.23
CTSA-214ENST00000606788 TNFSF18Q9UNG2 199 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 LSM5Q9Y4Y9 91 aaKnown RBP13.63□□□□□ -0.23
CTSA-214ENST00000606788 KMT2EQ8IZD2 1858 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 TRAPPC2LH3BP13 241 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 TNFSF12O43508 249 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 DIRAS3O95661 229 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 GRPP07492 148 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 ZDHHC11Q9H8X9 412 aa13.63□□□□□ -0.23
CTSA-214ENST00000606788 OR5AC1P0C628 307 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 ZNF728P0DKX0 622 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 ARR3P36575 388 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 AKR1C2P52895 323 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 TAS2R31P59538 309 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 AKR1C1Q04828 323 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 AANATQ16613 207 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
CTSA-214ENST00000606788 Q6ZSR3 168 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 RPRMLQ8N4K4 120 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 IL1F10Q8WWZ1 152 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 BCL2L2Q92843 193 aaPredicted RBP13.62□□□□□ -0.23
CTSA-214ENST00000606788 ANAPC10Q9UM13 185 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 ANKRD30BLA7E2S9 258 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 CD8AP01732 235 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 ZNF44P15621 663 aa13.62□□□□□ -0.23
CTSA-214ENST00000606788 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
CTSA-214ENST00000606788 RPA2P15927 270 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms