RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ERRFI1Q9UJM3 462 aaPredicted RBP18.33■□□□□ 0.52
USP6NL-204ENST00000606752 FLVCR2Q9UPI3 526 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 A0A1B0GUH1 482 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 DISC1C4P0D8 188 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 ATXN7O15265 892 aaPredicted RBP18.32■□□□□ 0.52
USP6NL-204ENST00000606752 PGA5P0DJD9 388 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 HRH1P35367 487 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 IL13RA2Q14627 380 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 ACTBL2Q562R1 376 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 BRICD5Q6PL45 260 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 SLC22A25Q6T423 547 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 LRRC46Q96FV0 321 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 NRIP2Q9BQI9 281 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 TLNRD1Q9H1K6 362 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 CA10Q9NS85 328 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 SCP2D1Q9UJQ7 156 aa18.32■□□□□ 0.52
USP6NL-204ENST00000606752 ESPL1Q14674 2120 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 IGHV3-64DA0A0J9YX35 117 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 PLSCR5A0PG75 271 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 NKX2-6A6NCS4 301 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 PEX14O75381 377 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 C11orf53Q8IXP5 236 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 BEST4Q8NFU0 473 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 OR2Z1Q8NG97 314 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 CA5BP1Q8WTZ4 195 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 SLC6A7Q99884 636 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 GINS4Q9BRT9 223 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 MRPL37Q9BZE1 423 aaKnown RBP18.31■□□□□ 0.52
USP6NL-204ENST00000606752 NDRG3Q9UGV2 375 aa18.31■□□□□ 0.52
USP6NL-204ENST00000606752 ZNF230Q9UIE0 474 aaPredicted RBP18.31■□□□□ 0.52
USP6NL-204ENST00000606752 HMX3A6NHT5 357 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 NOS1APO75052 506 aaPredicted RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 AMY2BP19961 511 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 MRPL24Q96A35 216 aaKnown RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 PRRT1Q99946 306 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 HDHD3Q9BSH5 251 aaPredicted RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 ZNF442Q9H7R0 627 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 SLC2A8Q9NY64 477 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 RCC2Q9P258 522 aaKnown RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 EDARQ9UNE0 448 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 NBEAQ8NFP9 2946 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 UBE2QL1A1L167 161 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 ARPC1BO15143 372 aaKnown RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 PMP2P02689 132 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 CSN2P05814 226 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 HNRNPCP07910 306 aaKnown RBP eCLIP18.3■□□□□ 0.524e-7■□□□□ 8.7
USP6NL-204ENST00000606752 TRAPPC2P0DI81 140 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 TRAPPC2BP0DI82 140 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 DTYMKP23919 212 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 IKZF1Q13422 519 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 NKPD1Q17RQ9 610 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 MICBQ29980 383 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 IDO2Q6ZQW0 420 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 AKAP14Q86UN6 197 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 HPS1Q92902 700 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 SLC25A21Q9BQT8 299 aaPredicted RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 CHST6Q9GZX3 395 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 SPACA1Q9HBV2 294 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 KCNJ16Q9NPI9 418 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 ZNF701Q9NV72 531 aaPredicted RBP18.3■□□□□ 0.52
USP6NL-204ENST00000606752 TAAR3PQ9P1P4 343 aa18.3■□□□□ 0.52
USP6NL-204ENST00000606752 A0A0A6YYJ9 748 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 C7orf66A4D0T2 115 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 ZSCAN5BA6NJL1 495 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 IFNA6P05013 189 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 DUSP1P28562 367 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 CD200P41217 278 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 MECP2P51608 486 aaKnown RBP18.29■□□□□ 0.52
USP6NL-204ENST00000606752 ZMYND11Q15326 602 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 VAX1Q5SQQ9 334 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 POC1AQ8NBT0 407 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 ESRP2Q9H6T0 727 aaKnown RBP18.29■□□□□ 0.52
USP6NL-204ENST00000606752 ATP23Q9Y6H3 246 aa18.29■□□□□ 0.52
USP6NL-204ENST00000606752 A6NLC8 198 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 NXPH2O95156 264 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 TAS2R46P59540 309 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 MPPED2Q15777 294 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 NCMAPQ5T1S8 102 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 PRAMEF6Q5VXH4 476 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 PRR7Q8TB68 274 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 GIMAP1Q8WWP7 306 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 GTF3AQ92664 365 aaKnown RBP18.28■□□□□ 0.52
USP6NL-204ENST00000606752 GHITMQ9H3K2 345 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 IFT22Q9H7X7 185 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 PYCARD-AS1I3L0S3 204 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 PRAF2O60831 178 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 SORDQ00796 357 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 CD300CQ08708 224 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 CDSNQ15517 529 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 SCGB2B2Q4G0G5 96 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 ZNF826PQ6ZT77 177 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 OR5H2Q8NGV7 314 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 MAFIPQ8WZ33 124 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 ELMOD3Q96FG2 381 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 HES4Q9HCC6 221 aa18.28■□□□□ 0.52
USP6NL-204ENST00000606752 C3orf80F5H4A9 247 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 PTBP3O95758 552 aaKnown RBP18.27■□□□□ 0.52
USP6NL-204ENST00000606752 GLAP06280 429 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 FCGR3AP08637 254 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 OR3A3P47888 321 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms