RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MRPS11P82912 194 aaKnown RBP13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 ANKRD55Q3KP44 614 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 TEX38Q6PEX7 206 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM123Q8N131 208 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 ZNF292O60281 2723 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 CCDC187A0A096LP49 1063 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 TRBV6-7A0A0A0MS04 114 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 SPAARA0A1B0GVQ0 90 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 IRF2P14316 349 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 SELEP16581 610 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 OMGP23515 440 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 RAB11AP62491 216 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 FNDC9Q8TBE3 224 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 SLC46A1Q96NT5 459 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 WSB1Q9Y6I7 421 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 PHF3Q92576 2039 aaKnown RBP13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 C20orf202A1L168 122 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 SLC33A1O00400 549 aaPredicted RBP13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 IL11P20809 199 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 DMRTC1Q5HYR2 192 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 ZNF774Q6NX45 483 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 PRRX2Q99811 253 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 RAB18Q9NP72 206 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
PPFIA3-206ENST00000602655 A0A1W2PNR3 127 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 CCL20P78556 96 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 OR1N1Q8NGS0 311 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 WDR76Q9H967 626 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 UPK3AO75631 287 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 PRPS1P60891 318 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 HNF4GQ14541 408 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 MEP1BQ16820 701 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 DCAF10Q5QP82 559 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 ANKRD37Q7Z713 158 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 NPEPL1Q8NDH3 523 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 RNASE8Q8TDE3 154 aaKnown RBP13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM18Q96B42 140 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 ZNF764Q96H86 408 aaPredicted RBP13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 HIST1H2AAQ96QV6 131 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 SLC26A1Q9H2B4 701 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM127O75204 238 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 ALOX5APP20292 161 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 WDR25Q64LD2 544 aaPredicted RBP13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM183AQ8IXX5 376 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 IL22RA1Q8N6P7 574 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 RNF128Q8TEB7 428 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 ADGRG7Q96K78 797 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 SERINC1Q9NRX5 453 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 LAMP3Q9UQV4 416 aa13.48□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM269A0A1B0GVZ9 245 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 SFT2D2O95562 160 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 PNLIPP16233 465 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 FUT3P21217 361 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 MMP16P51512 607 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 RPL23AP62750 156 aaKnown RBP13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 FAM3AP98173 230 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 ATP1A1-AS1Q5TC04 95 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 LRFN1Q9P244 771 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 A0A087WUJ7 227 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 A0A0B4J2E0 115 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 A0A1B0GX12 115 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 DANCRP0C864 163 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 TBPP20226 339 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 CDKN2AP42771 156 aaKnown RBP13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM268Q5VZI3 342 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 ZNF100Q8IYN0 542 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 EXD3Q8N9H8 876 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 OR2G3Q8NGZ4 309 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 DKKL1Q9UK85 242 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 EML5Q05BV3 1969 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 IFNL4K9M1U5 179 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 TRAPPC6AO75865 159 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 AMY2BP19961 511 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 RABEPKQ7Z6M1 372 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 OR13C3Q8NGS6 347 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 RNF24Q9Y225 148 aa13.47□□□□□ -0.25
PPFIA3-206ENST00000602655 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 GCGP01275 180 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 GP1BBP13224 206 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 RND3P61587 244 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 TMEM225Q6GV28 225 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 SLC16A9Q7RTY1 509 aa13.46□□□□□ -0.25
PPFIA3-206ENST00000602655 OR5H2Q8NGV7 314 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms