RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 A0A1W2PR64 198 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 PAHP00439 452 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 RNASE1P07998 156 aaKnown RBP13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 DUSP1P28562 367 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 PPP3R1P63098 170 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 PARP16Q8N5Y8 322 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 Q8N7P7 452 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 OR5D13Q8NGL4 314 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 OR52N1Q8NH53 320 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 CHST6Q9GZX3 395 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 VCX3BQ9H321 246 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 CNOT2Q9NZN8 540 aaKnown RBP13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 GSTK1Q9Y2Q3 226 aa13.03□□□□□ -0.32
PPFIA4-213ENST00000601609 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 MEX3AA1L020 520 aaKnown RBP13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 RNASEK-C17orf49H0YIS7 233 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 K7N7A8 449 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 SIRPB1O00241 398 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 NPFFO15130 113 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 ATP6V1G2O95670 118 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 MT-ND2P03891 347 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 CRYBA1P05813 215 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 CCL3L1P16619 93 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 AQP4P55087 323 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 GRK1Q15835 563 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 Q6YL49 198 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 PNKDQ8N490 385 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 PPP1R35Q8TAP8 253 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 TBC1D15Q8TC07 691 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 SMIM19Q96E16 107 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 EXOSC4Q9NPD3 245 aaKnown RBP13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 ZNF281Q9Y2X9 895 aa13.02□□□□□ -0.33
PPFIA4-213ENST00000601609 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 MEIOCA2RUB1 952 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 BTBD17A6NE02 478 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 CLDN34H7C241 214 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 MELTFP08582 738 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 FBP1P09467 338 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 COX7A1P24310 79 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TAS2R43P59537 309 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SCN1BQ07699 218 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 ZNF273Q14593 569 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 KISS1Q15726 138 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TUSC1Q2TAM9 212 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SPIN3Q5JUX0 258 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TMEM200BQ69YZ2 307 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 METAP1DQ6UB28 335 aaPredicted RBP13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 C1orf122Q6ZSJ8 110 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 OR8H2Q8N162 312 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TFAP2CQ92754 450 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 TMEM106AQ96A25 262 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SNX22Q96L94 193 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 PSORS1C1Q9UIG5 152 aa13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SF3B6Q9Y3B4 125 aaKnown RBP13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 SIRT4Q9Y6E7 314 aaPredicted RBP13.01□□□□□ -0.33
PPFIA4-213ENST00000601609 IGKV1-12A0A0C4DH73 117 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 TMEM82A0PJX8 343 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 SH2D1BO14796 132 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 OGG1O15527 345 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 ZNF737O75373 536 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 KDM4BO94953 1096 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 LALBAP00709 142 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 IGKV1D-12P01611 117 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 ZNF44P15621 663 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 SAA4P35542 130 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 ERVFRD-1P60508 538 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 FOXL1Q12952 345 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 C16orf87Q6PH81 154 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 ZNF782Q6ZMW2 699 aaPredicted RBP13□□□□□ -0.33
PPFIA4-213ENST00000601609 RNF144BQ7Z419 303 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 OR51A2Q8NGJ7 313 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 OR13C5Q8NGS8 318 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 NRG4Q8WWG1 115 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 GHSRQ92847 366 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 HMG20AQ9NP66 347 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 SCN3BQ9NY72 215 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 CKLFQ9UBR5 152 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 ERGIC3Q9Y282 383 aa13□□□□□ -0.33
PPFIA4-213ENST00000601609 hADV38S2A0JD32 116 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 ALX3O95076 343 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 HKR1P10072 659 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 C21orf33P30042 268 aaPredicted RBP12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 UBE2E1P51965 193 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 WNT4P56705 351 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 AWAT1Q58HT5 328 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 DDI2Q5TDH0 399 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 LAIR2Q6ISS4 152 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 SAXO1Q8IYX7 474 aa12.99□□□□□ -0.33
PPFIA4-213ENST00000601609 TPRX1Q8N7U7 411 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms