RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CHRM2P08172 466 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 TMEM225BP0DP42 221 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 LMO1P25800 156 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 FGF9P31371 208 aaPredicted RBP12.1□□□□□ -0.47
LTBP4-228ENST00000600499 MTNR1BP49286 362 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 FGF12P61328 243 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 HSD17B12Q53GQ0 312 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 LRRC10Q5BKY1 277 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 PNLDC1Q8NA58 520 aaKnown RBP12.1□□□□□ -0.47
LTBP4-228ENST00000600499 TSPAN14Q8NG11 270 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
LTBP4-228ENST00000600499 MUL1Q969V5 352 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 FOXRED1Q96CU9 486 aaPredicted RBP12.1□□□□□ -0.47
LTBP4-228ENST00000600499 GPER1Q99527 375 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 TCF7L1Q9HCS4 588 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 OPN4Q9UHM6 478 aa12.1□□□□□ -0.47
LTBP4-228ENST00000600499 K7N7A8 449 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 MAS1P04201 325 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 SELLP14151 372 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 JUNBP17275 347 aaPredicted RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 GABRA2P47869 451 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 OR3A4PP47883 348 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 C1orf100Q5SVJ3 147 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 DCAF12L2Q5VW00 463 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 SATL1Q86VE3 508 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 TNFAIP8L1Q8WVP5 186 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 C1orf147Q96MC9 270 aaPredicted RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 DCTN5Q9BTE1 182 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 CNTD2Q9H8S5 307 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
LTBP4-228ENST00000600499 CDC42EP3Q9UKI2 254 aa12.09□□□□□ -0.47
LTBP4-228ENST00000600499 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.47
LTBP4-228ENST00000600499 TRAV1-2A0A0B4J238 106 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 ENSAO43768 121 aaKnown RBP12.08□□□□□ -0.48
LTBP4-228ENST00000600499 AVPP01185 164 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 FSHBP01225 129 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 TFF1P04155 84 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 PRKACAP17612 351 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 PSMB9P28065 219 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 Q6P435 159 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
LTBP4-228ENST00000600499 BTN2A1Q7KYR7 527 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 BATF2Q8N1L9 274 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 TEX29Q8N6K0 151 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 TBC1D15Q8TC07 691 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 SNX22Q96L94 193 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.48
LTBP4-228ENST00000600499 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 METTL9Q9H1A3 318 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
LTBP4-228ENST00000600499 TRBV23-1A0A0A0MS06 115 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 HAND1O96004 215 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 TK1P04183 234 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 CFPP27918 469 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 CEBPDP49716 269 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-228ENST00000600499 COL10A1Q03692 680 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 IKZF1Q13422 519 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 GPR176Q14439 515 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 GLT8D1Q68CQ7 371 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-228ENST00000600499 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 C17orf107Q6ZR85 190 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 FGFRL1Q8N441 504 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 CHST4Q8NCG5 386 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 OR4D6Q8NGJ1 314 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 OR5D13Q8NGL4 314 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 ST8SIA4Q92187 359 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
LTBP4-228ENST00000600499 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 GFI1Q99684 422 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 SLITRK2Q9H156 845 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 IFT22Q9H7X7 185 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 OR14J1Q9UGF5 321 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 GLS2Q9UI32 602 aa12.07□□□□□ -0.48
LTBP4-228ENST00000600499 NIPBLQ6KC79 2804 aaeCLIP12.07□□□□□ -0.48
LTBP4-228ENST00000600499 SETD2Q9BYW2 2564 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-228ENST00000600499 TMEM82A0PJX8 343 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 SH2D1BO14796 132 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 SLC22A1O15245 554 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 CDRT1O95170 752 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 MMP9P14780 707 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
LTBP4-228ENST00000600499 HNF1AP20823 631 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 PAX5Q02548 391 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 RSU1Q15404 277 aa12.06□□□□□ -0.48
LTBP4-228ENST00000600499 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms