RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 STEAP1Q9UHE8 339 aa16.68■□□□□ 0.26
SHKBP1-222ENST00000600320 MAB21L2Q9Y586 359 aa16.68■□□□□ 0.26
SHKBP1-222ENST00000600320 OTOGQ6ZRI0 2925 aa16.68■□□□□ 0.26
SHKBP1-222ENST00000600320 BPNT1O95861 308 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 CSTBP04080 98 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 RPS2P15880 293 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 PRDX2P32119 198 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 PLA2G7Q13093 441 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 UNC119Q13432 240 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 SPCS2Q15005 226 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 ZNF146Q15072 292 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 PDCD1Q15116 288 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 KCNJ8Q15842 424 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 OSR2Q8N2R0 312 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 FGFRL1Q8N441 504 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 OR51T1Q8NGJ9 327 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 RAB2BQ8WUD1 216 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 FAM46BQ96A09 425 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 FAM3DQ96BQ1 224 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 ISOC1Q96CN7 298 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 DCSTAMPQ9H295 470 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 ZNF581Q9P0T4 197 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 DAPK2Q9UIK4 370 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 PCDHB10Q9UN67 800 aa16.67■□□□□ 0.26
SHKBP1-222ENST00000600320 TMEM14DPA8MWL7 114 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 FAM157AC9JC47 383 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 LDLRAD4O15165 306 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 NDUFA2O43678 99 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 ZNF780AO75290 641 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 HAND1O96004 215 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 UBBP0CG47 229 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 BMXP51813 675 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 GPR176Q14439 515 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 C2orf76Q3KRA6 126 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 Q6P435 159 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 SPNS3Q6ZMD2 512 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 NEIL1Q96FI4 390 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 SDSLQ96GA7 329 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 BCL7BQ9BQE9 202 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 BARHL1Q9BZE3 327 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 KAAG1Q9UBP8 84 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 MIOXQ9UGB7 285 aa16.66■□□□□ 0.26
SHKBP1-222ENST00000600320 NKX6-3A6NJ46 265 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 H3BMQ9 156 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 SMAD7O15105 426 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 SIGLEC5O15389 551 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 TMPRSS2O15393 492 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 CRTAPO75718 401 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 MPIG6BO95866 241 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 GTF2F2P13984 249 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 ARSBP15848 533 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 MGMTP16455 207 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 CAPZA1P52907 286 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 RBM11P57052 281 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 COL10A1Q03692 680 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 IL13RA2Q14627 380 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 NHLRC3Q5JS37 347 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 SPIN3Q5JUX0 258 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 FIP1L1Q6UN15 594 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 ZNF841Q6ZN19 808 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 USP43Q70EL4 1123 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 OR8B3Q8NGG8 313 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 OR8B2Q96RD0 313 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 DNTTIP1Q9H147 329 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 LIN7BQ9HAP6 207 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 ST3GAL6Q9Y274 331 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 AKAP9Q99996 3911 aa16.65■□□□□ 0.26
SHKBP1-222ENST00000600320 TMEM272A0A1B0GTI8 110 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 TMEM82A0PJX8 343 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 DPPA5A6NC42 116 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 OR2H2O95918 312 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 PAHP00439 452 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 SNRPBP14678 240 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 TAF9Q16594 264 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 IDNKQ5T6J7 187 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 SLC36A1Q7Z2H8 476 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 OR2W3Q7Z3T1 314 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 ZNRF1Q8ND25 227 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 SLC25A46Q96AG3 418 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 RAB39BQ96DA2 213 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 CYYR1Q96J86 154 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 COX4I2Q96KJ9 171 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 SELENOIQ9C0D9 397 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 CST11Q9H112 138 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 SEBOXQ9HB31 216 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 PCDHB16Q9NRJ7 776 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 OR5V1Q9UGF6 321 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 MED13LQ71F56 2210 aa16.64■□□□□ 0.25
SHKBP1-222ENST00000600320 CCDC160A6NGH7 325 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 SIRPB1O00241 398 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 DVL1O14640 695 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 GEMIN2O14893 280 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 NOL3O60936 208 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 ZNF737O75373 536 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 CHRM2P08172 466 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 PITPNBP48739 271 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 IL13RA1P78552 427 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 SCN1BQ07699 218 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 IKZF1Q13422 519 aa16.63■□□□□ 0.25
SHKBP1-222ENST00000600320 TMEM249Q2WGJ8 235 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms