RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 LY6EQ16553 131 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 ZNF782Q6ZMW2 699 aaPredicted RBP12.81□□□□□ -0.36
VRK3-221ENST00000600284 CBR4Q8N4T8 237 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 OR4C13Q8NGP0 309 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 FOXRED1Q96CU9 486 aaPredicted RBP12.81□□□□□ -0.36
VRK3-221ENST00000600284 Q96MT0 163 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 C9orf16Q9BUW7 83 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 RHOFQ9HBH0 211 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 GMPPBQ9Y5P6 360 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
VRK3-221ENST00000600284 J3QLW9 94 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 MGST3O14880 152 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 INMTO95050 263 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 ARG1P05089 322 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 ZNF19P17023 458 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 GABRB1P18505 474 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 POU3F4P49335 361 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 EFNB2P52799 333 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 DEFA6Q01524 100 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 MRPL28Q13084 256 aaKnown RBP12.8□□□□□ -0.36
VRK3-221ENST00000600284 ALKBH1Q13686 389 aaKnown RBP12.8□□□□□ -0.36
VRK3-221ENST00000600284 GALEQ14376 348 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 GRK1Q15835 563 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 C2orf68Q2NKX9 166 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 ZNF626Q68DY1 528 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 OR52N4Q8NGI2 321 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 OR2T6Q8NHC8 308 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 LGALS12Q96DT0 336 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 PELI1Q96FA3 418 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 C4orf36Q96KX1 117 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 HMG20AQ9NP66 347 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 INPP5EQ9NRR6 644 aa12.8□□□□□ -0.36
VRK3-221ENST00000600284 RBFOX1Q9NWB1 397 aaKnown RBP12.8□□□□□ -0.36
VRK3-221ENST00000600284 OR4C45A6NMZ5 311 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 SH2D1BO14796 132 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 PSPNO60542 156 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 ALX3O95076 343 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 FADS2O95864 444 aaKnown RBP12.79□□□□□ -0.36
VRK3-221ENST00000600284 IGHA1P01876 353 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 OCM2P0CE71 109 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 OCMP0CE72 109 aaPredicted RBP12.79□□□□□ -0.36
VRK3-221ENST00000600284 BCL3P20749 454 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 GABRR1P24046 479 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 NPBWR2P48146 333 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 HERPUD1Q15011 391 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 Q6ZTK2 550 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 OR13C3Q8NGS6 347 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 HAVCR2Q8TDQ0 301 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 PCDHGB5Q9Y5G0 923 aa12.79□□□□□ -0.36
VRK3-221ENST00000600284 FUOMA2VDF0 154 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 KDM4BO94953 1096 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 DBTP11182 482 aaKnown RBP12.78□□□□□ -0.36
VRK3-221ENST00000600284 PRKACAP17612 351 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 LMO1P25800 156 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 PAX6P26367 422 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 DYNLT3P51808 116 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 RAB40BQ12829 278 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 EDDM3AQ14507 147 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 PDLIM3Q53GG5 364 aaPredicted RBP12.78□□□□□ -0.36
VRK3-221ENST00000600284 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 TCF23Q7RTU1 214 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 ZNF676Q8N7Q3 588 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 RPS4Y2Q8TD47 263 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 ALG8Q9BVK2 526 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 IL36RNQ9UBH0 155 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
VRK3-221ENST00000600284 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 WNK1Q9H4A3 2382 aa12.78□□□□□ -0.36
VRK3-221ENST00000600284 TMEM212A6NML5 194 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 DUSP1P28562 367 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 P2RX3P56373 397 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 FAM189A2Q15884 450 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 SSX2Q16385 188 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 SERPINA12Q8IW75 414 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 DYNAPQ8N1N2 210 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 OR4S1Q8NGB4 309 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 OR5D14Q8NGL3 314 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 OR10AC1Q8NH08 325 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 CHST6Q9GZX3 395 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 COMMD4Q9H0A8 199 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 TMEM133Q9H2Q1 129 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms