RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 SH2D2AQ9NP31 389 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF275Q9NSD4 429 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TCRBV16S1A1N1A0A5B0 115 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 ADAM11O75078 769 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 KIR2DS2P43631 304 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TNFAIP6P98066 277 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 ANKRD37Q7Z713 158 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TBC1D26Q86UD7 250 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 OR1L6Q8NGR2 347 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 A0A1W2PN81 502 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 LILRA5A6NI73 299 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 GALNSP34059 522 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 PRICKLE4Q2TBC4 344 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 SEC11CQ9BY50 192 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 Q9N2K0 584 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 KNL1Q8NG31 2342 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 KLK10O43240 276 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 PDCD6O75340 191 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 PRR35P0CG20 571 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 NPY1RP25929 384 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 HFEQ30201 348 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 WDR73Q6P4I2 378 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 MSRB3Q8IXL7 192 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 TM4SF19Q96DZ7 209 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 PIK3IP1Q96FE7 263 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 CDRT15L2A8MXV6 281 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 LMO7DNF2Z398 122 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 H3BVH4 76 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 HTN1P15515 57 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 GABRG2P18507 467 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 OR13G1Q8NGZ3 307 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 OR10D3Q8NH80 312 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 FLYWCH2Q96CP2 140 aaKnown RBP10.5□□□□□ -0.73
SCN8A-208ENST00000599343 FKBP11Q9NYL4 201 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-208ENST00000599343 CRISP2P16562 243 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 COTL1Q14019 142 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 FAM109BQ6ICB4 259 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-208ENST00000599343 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 ANKRD33Q7Z3H0 272 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 PDPNQ86YL7 162 aa10.5□□□□□ -0.73
SCN8A-208ENST00000599343 IGHV5-51A0A0C4DH38 117 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 AP4M1O00189 453 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 CTSVO60911 334 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 RNPS1Q15287 305 aaKnown RBP10.49□□□□□ -0.73
SCN8A-208ENST00000599343 RNF165Q6ZSG1 346 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 LPAR5Q9H1C0 372 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 HLA-DRB5Q30154 266 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 SCGB1D4Q6XE38 83 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 FAM219AQ8IW50 185 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 OR2A5Q96R48 311 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 ATP5SQ99766 215 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 PLPP3O14495 311 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 CBLN2Q8IUK8 224 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 ADIPOR1Q96A54 375 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 CRYABP02511 175 aaKnown RBP10.49□□□□□ -0.73
SCN8A-208ENST00000599343 BSXQ3C1V8 233 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 TP53I13Q8NBR0 393 aaPredicted RBP10.49□□□□□ -0.73
SCN8A-208ENST00000599343 OR10AC1Q8NH08 325 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 ABHD1Q96SE0 405 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 GPX7Q96SL4 187 aaPredicted RBP10.49□□□□□ -0.73
SCN8A-208ENST00000599343 SLC26A1Q9H2B4 701 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 LY86O95711 162 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 CTLA4P16410 223 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 TCTAP57738 103 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 ELOBQ15370 118 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 HIST3H3Q16695 136 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 LYRM7Q5U5X0 104 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 OR2T10Q8NGZ9 312 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 SNX22Q96L94 193 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 GPR27Q9NS67 375 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 SERGEFQ9UGK8 458 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 AMDHD2Q9Y303 409 aa10.49□□□□□ -0.73
SCN8A-208ENST00000599343 A0A087X0M5 115 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 A0A1B0GX30 115 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF253O75346 499 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 HLA-GP17693 338 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 RPS4Y1P22090 263 aaKnown RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 IGSF11Q5DX21 431 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 MRPL54Q6P161 138 aaKnown RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF880Q6PDB4 577 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 OR8B12Q8NGG6 310 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 NUBPLQ8TB37 319 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 COA4Q9NYJ1 87 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 C11orf94C9JXX5 98 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 M0R143 59 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 LANCL1O43813 399 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF205O95201 554 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 GABRA1P14867 456 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 PRRX1P54821 245 aa10.48□□□□□ -0.73
SCN8A-208ENST00000599343 INPP5JQ15735 1006 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-208ENST00000599343 MPV17LQ2QL34 196 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms