RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 PNMA8CA0A1B0GUJ8 204 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 KDM4BO94953 1096 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 ATP6V1G2O95670 118 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 HAND1O96004 215 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 RAB3AP20336 220 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 SNU13P55769 128 aaKnown RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 BPIFB3P59826 476 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 RPL31P62899 125 aaKnown RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 UBA52P62987 128 aaKnown RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 RIPK1Q13546 671 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 C1orf122Q6ZSJ8 110 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 CMTM4Q8IZR5 234 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 ASCC1Q8N9N2 400 aaKnown RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 OR52N4Q8NGI2 321 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 TNFRSF14Q92956 283 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 NKX3-1Q99801 234 aaPredicted RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 ANKRD60Q9BZ19 345 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 FAM234AQ9H0X4 552 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 VCX3BQ9H321 246 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 SEBOXQ9HB31 216 aaPredicted RBP18.71■□□□□ 0.59
IRF3-220ENST00000598108 NEK6Q9HC98 313 aa18.71■□□□□ 0.59
IRF3-220ENST00000598108 DNAJC9-AS1A6NH13 148 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 RNASEK-C17orf49H0YIS7 233 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 TRIM77I1YAP6 450 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 M0R1W7 72 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 MYL12BO14950 172 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 TMEM225BP0DP42 221 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 PRKACAP17612 351 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 WNT4P56705 351 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 BAMBIQ13145 260 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 KLRD1Q13241 179 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 ZNF146Q15072 292 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 RNLSQ5VYX0 342 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 C17orf107Q6ZR85 190 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 SAXO1Q8IYX7 474 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 PIP4P2Q8N4L2 257 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 FAM216AQ8WUB2 273 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 PRDM13Q9H4Q3 707 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 ERGIC3Q9Y282 383 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 PCDHGB5Q9Y5G0 923 aa18.7■□□□□ 0.58
IRF3-220ENST00000598108 CD2P06729 351 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 ERVFRD-1P60508 538 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 SATL1Q86VE3 508 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 C11orf42Q8N5U0 333 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 ZSCAN4Q8NAM6 433 aaPredicted RBP18.69■□□□□ 0.58
IRF3-220ENST00000598108 CDCA4Q9BXL8 241 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 SCN3BQ9NY72 215 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 GSTK1Q9Y2Q3 226 aa18.69■□□□□ 0.58
IRF3-220ENST00000598108 A0A1W2PRD5 423 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 A0A1W2PRF3 423 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 A0A1W2PRM7 423 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 PSPNO60542 156 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 CELP19835 753 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 PRTN3P24158 256 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 TAS2R43P59537 309 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 SLC35A2P78381 396 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 ZNF273Q14593 569 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 SLC9A3R2Q15599 337 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 YIF1BQ5BJH7 314 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 METAP1DQ6UB28 335 aaPredicted RBP18.68■□□□□ 0.58
IRF3-220ENST00000598108 PNKDQ8N490 385 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 MYDGFQ969H8 173 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 SNX22Q96L94 193 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 OR5M11Q96RB7 305 aa18.68■□□□□ 0.58
IRF3-220ENST00000598108 METTL8Q9H825 291 aaKnown RBP18.68■□□□□ 0.58
IRF3-220ENST00000598108 UNKLQ9H9P5 680 aaKnown RBP18.68■□□□□ 0.58
IRF3-220ENST00000598108 A0A0U1RQK1 487 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 A0A1W2PPK0 400 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 MEX3AA1L020 520 aaKnown RBP18.67■□□□□ 0.58
IRF3-220ENST00000598108 GABRPO00591 440 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 ALDOBP05062 364 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 CCL3L1P16619 93 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 IGFBP3P17936 291 aaPredicted RBP18.67■□□□□ 0.58
IRF3-220ENST00000598108 IRF3Q14653 427 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 Q499Y3 187 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 SPIN3Q5JUX0 258 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 HCP5Q6MZN7 132 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 FIP1L1Q6UN15 594 aaKnown RBP18.67■□□□□ 0.58
IRF3-220ENST00000598108 OR8H2Q8N162 312 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 OR4S1Q8NGB4 309 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 CHST6Q9GZX3 395 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 DUSP21Q9H596 190 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 TMEM138Q9NPI0 162 aa18.67■□□□□ 0.58
IRF3-220ENST00000598108 LSM2Q9Y333 95 aaKnown RBP18.67■□□□□ 0.58
IRF3-220ENST00000598108 TRAV8-7A0A075B6U6 113 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 TRBV5-7A0A0A0MS05 114 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 MAGEB3O15480 346 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 GABRR1P24046 479 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 BLMHQ13867 455 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 Q6YL49 198 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 TNFAIP8L1Q8WVP5 186 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 ZDHHC16Q969W1 377 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 OR14A2Q96R54 314 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 GPER1Q99527 375 aa18.66■□□□□ 0.58
IRF3-220ENST00000598108 MAGEA13PA6NCF6 341 aa18.65■□□□□ 0.58
IRF3-220ENST00000598108 SIRPB1O00241 398 aa18.65■□□□□ 0.58
IRF3-220ENST00000598108 SH2D1BO14796 132 aa18.65■□□□□ 0.58
IRF3-220ENST00000598108 PIN1P1O15428 100 aa18.65■□□□□ 0.58
IRF3-220ENST00000598108 HOXA3O43365 443 aaPredicted RBP18.65■□□□□ 0.58
IRF3-220ENST00000598108 GPX5O75715 221 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms