RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 DUX4L9Q6RFH8 374 aaPredicted RBP18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 LINC01356Q8N9X3 169 aa18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 SSBP3Q9BWW4 388 aaPredicted RBP18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 GHRLQ9UBU3 117 aa18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 DUX4Q9UBX2 424 aa18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 CLN8Q9UBY8 286 aa18.42■□□□□ 0.54
CHMP2A-204ENST00000597848 B4DSR2 109 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 DVL1O14640 695 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 SH2D1BO14796 132 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 SLC22A1O15245 554 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 SIGLEC5O15389 551 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 PHF1O43189 567 aaPredicted RBP18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 HAND1O96004 215 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 CHRM2P08172 466 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 UBBP0CG47 229 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 GTF2F2P13984 249 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 TGFBR1P36897 503 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 CAPZA1P52907 286 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 LCN2P80188 198 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 ANKRD13BQ86YJ7 626 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 OSR2Q8N2R0 312 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 SDSLQ96GA7 329 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 NAA50Q9GZZ1 169 aaKnown RBP18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 MAB21L2Q9Y586 359 aa18.41■□□□□ 0.54
CHMP2A-204ENST00000597848 A0A1W2PP11 408 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 FOXH1O75593 365 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 CRTAPO75718 401 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 CLEC2LP0C7M8 214 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 SELLP14151 372 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 RANBP1P43487 201 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 CLDN12P56749 244 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 COL10A1Q03692 680 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ZNF146Q15072 292 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 LRRC10Q5BKY1 277 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 WDR25Q64LD2 544 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ZNF841Q6ZN19 808 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ZNF561Q8N587 486 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ASCC1Q8N9N2 400 aaKnown RBP18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ZNRF1Q8ND25 227 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 TMEM185AQ8NFB2 350 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 Q8NFD4 153 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ST8SIA4Q92187 359 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 FAM46BQ96A09 425 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 MSI2Q96DH6 328 aaKnown RBP18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 C1orf159Q96HA4 380 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 C1orf147Q96MC9 270 aaPredicted RBP18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 CST11Q9H112 138 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 BANF2Q9H503 90 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 METRNQ9UJH8 293 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 ST3GAL6Q9Y274 331 aa18.4■□□□□ 0.54
CHMP2A-204ENST00000597848 CR1P17927 2039 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 IFITM5A6NNB3 132 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 NOTOA8MTQ0 251 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 DEGS1O15121 323 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 TGFAP01135 160 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 ZNF44P15621 663 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 ARSBP15848 533 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 ZFP36P26651 326 aaKnown RBP18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 NPY4RP50391 375 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 CAV3P56539 151 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 VBP1P61758 197 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 NCS1P62166 190 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 PDCD1Q15116 288 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 PIGYQ3MUY2 71 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 FAM166AQ6J272 317 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 SLC16A12Q6ZSM3 486 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 NR2C2APQ86WQ0 139 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 CLVS1Q8IUQ0 354 aaPredicted RBP18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 OR51T1Q8NGJ9 327 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 SLC25A28Q96A46 364 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 SLC25A10Q9UBX3 287 aaPredicted RBP18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 STEAP1Q9UHE8 339 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 FLNAP21333 2647 aaKnown RBP18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 MED13LQ71F56 2210 aa18.39■□□□□ 0.53
CHMP2A-204ENST00000597848 SIRPB1O00241 398 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 BPNT1O95861 308 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 MSMBP08118 114 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 MGMTP16455 207 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 NDUFB7P17568 137 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 SERPINB10P48595 397 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 OR10K2Q6IF99 312 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 TMEM104Q8NE00 496 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 OR51D1Q8NGF3 324 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 FAM3DQ96BQ1 224 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 SMR3AQ99954 134 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 SELENOIQ9C0D9 397 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 KCNK15Q9H427 330 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 SEBOXQ9HB31 216 aaPredicted RBP18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 OR5V1Q9UGF6 321 aa18.38■□□□□ 0.53
CHMP2A-204ENST00000597848 A0A0G2JK05 382 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 AIPO00170 330 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 GABARAPO95166 117 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 MPIG6BO95866 241 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 OR2H2O95918 312 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 VSIG8P0DPA2 414 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 SLC2A2P11168 524 aaPredicted RBP18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 ZNF16P17020 682 aaPredicted RBP18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 GABRR1P24046 479 aa18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 RBM11P57052 281 aaKnown RBP18.37■□□□□ 0.53
CHMP2A-204ENST00000597848 IL13RA2Q14627 380 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms