RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CCDC159P0C7I6 412 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 CCL3L1P16619 93 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 DCKP27707 260 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 TGFBR2P37173 567 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 NPBWR2P48146 333 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 DLX6P56179 175 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 ERVFRD-1P60508 538 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 SPIN3Q5JUX0 258 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 OLFML2AQ68BL7 652 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 C17orf107Q6ZR85 190 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 GDPD3Q7L5L3 318 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 SAXO1Q8IYX7 474 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 OR8H2Q8N162 312 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 PACRGLQ8N7B6 248 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 ASCC1Q8N9N2 400 aaKnown RBP8.57□□□□□ -1.04
CCDC9-203ENST00000596938 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 EMG1Q92979 244 aaKnown RBP8.57□□□□□ -1.04
CCDC9-203ENST00000596938 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 HMG20AQ9NP66 347 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 RBFOX1Q9NWB1 397 aaKnown RBP8.57□□□□□ -1.04
CCDC9-203ENST00000596938 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.57□□□□□ -1.04
CCDC9-203ENST00000596938 GLS2Q9UI32 602 aa8.57□□□□□ -1.04
CCDC9-203ENST00000596938 IRGMA1A4Y4 181 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 SH2D1BO14796 132 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 TSPAN9O75954 239 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 KDM4BO94953 1096 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 INMTO95050 263 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 OCM2P0CE71 109 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 OCMP0CE72 109 aaPredicted RBP8.56□□□□□ -1.04
CCDC9-203ENST00000596938 LIMS3P0CW19 117 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 LIMS4P0CW20 117 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF728P0DKX0 622 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 BCL3P20749 454 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 LMO1P25800 156 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 PEX2P28328 305 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 ERP29P30040 261 aaKnown RBP8.56□□□□□ -1.04
CCDC9-203ENST00000596938 POU3F4P49335 361 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 EDDM3BP56851 147 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF273Q14593 569 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 CCDC58Q4VC31 144 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF691Q5VV52 312 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 TTC23Q5W5X9 447 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 RPL22L1Q6P5R6 122 aaKnown RBP8.56□□□□□ -1.04
CCDC9-203ENST00000596938 CRIP3Q6Q6R5 217 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 OR52N4Q8NGI2 321 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 OR13C9Q8NGT0 318 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 C17orf50Q8WW18 174 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 WFDC12Q8WWY7 111 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 SSX3Q99909 188 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 COMMD4Q9H0A8 199 aa8.56□□□□□ -1.04
CCDC9-203ENST00000596938 IGKV1-12A0A0C4DH73 117 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 MGST3O14880 152 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 SULT1B1O43704 296 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PSPNO60542 156 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 CLPXO76031 633 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 IGKV1D-12P01611 117 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PIPP12273 146 aaPredicted RBP8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PRKACAP17612 351 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 GABRR1P24046 479 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 DUSP1P28562 367 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 LGALS4P56470 323 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 ADARB1P78563 741 aaKnown RBP8.55□□□□□ -1.04
CCDC9-203ENST00000596938 KISS1Q15726 138 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 GRK1Q15835 563 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 SMN1Q16637 294 aaKnown RBP8.55□□□□□ -1.04
CCDC9-203ENST00000596938 LRRC36Q1X8D7 754 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 ZNF529Q6P280 563 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 TMPRSS11AQ6ZMR5 421 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 Q6ZSV7 163 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 DHRSXQ8N5I4 330 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 OR11H6Q8NGC7 330 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 OR13D1Q8NGV5 346 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PPP1R35Q8TAP8 253 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 RPS4Y2Q8TD47 263 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PDCD1LG2Q9BQ51 273 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 BABAM2Q9NXR7 383 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 IL36RNQ9UBH0 155 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 DHDHQ9UQ10 334 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 PCDHGB5Q9Y5G0 923 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 LINC00312Q9Y6C7 94 aa8.55□□□□□ -1.04
CCDC9-203ENST00000596938 MGAM2Q2M2H8 2515 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 A0A0G2JK05 382 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 VGLL3A8MV65 326 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 OGG1O15527 345 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 IGHV1-8P0DP01 117 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 ETV1P50549 477 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 GTF2A1P52655 376 aaPredicted RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 PROK1P58294 105 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 ZP1P60852 638 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 IL18R1Q13478 541 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 LRRC75BQ2VPJ9 315 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 DHRS7BQ6IAN0 325 aaPredicted RBP8.54□□□□□ -1.04
CCDC9-203ENST00000596938 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 SETD9Q8NE22 299 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 OR4S1Q8NGB4 309 aa8.54□□□□□ -1.04
CCDC9-203ENST00000596938 PIFOQ8TCI5 191 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms