RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 BPIFB2Q8N4F0 458 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 MS4A15Q8N5U1 240 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 C8orf46Q8TAG6 207 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 WDFY2Q96P53 400 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 DERL3Q96Q80 235 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 TMED9Q9BVK6 235 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 RHOFQ9HBH0 211 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 IL36RNQ9UBH0 155 aa12.38□□□□□ -0.43
IRF3-211ENST00000596644 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 TRBV23-1A0A0A0MS06 115 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 TCF21O43680 179 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 TK1P04183 234 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 SFTPBP07988 381 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 IGFBP3P17936 291 aaPredicted RBP12.37□□□□□ -0.43
IRF3-211ENST00000596644 FPR2P25090 351 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 DUSP1P28562 367 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
IRF3-211ENST00000596644 TGFBR2P37173 567 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
IRF3-211ENST00000596644 LIPKQ5VXJ0 399 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
IRF3-211ENST00000596644 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 DMRTB1Q96MA1 342 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 FOXJ3Q9UPW0 622 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 GSTK1Q9Y2Q3 226 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 KPTNQ9Y664 436 aa12.37□□□□□ -0.43
IRF3-211ENST00000596644 SVEP1Q4LDE5 3571 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 TRAV8-7A0A075B6U6 113 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 K7N7A8 449 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 SH2D1BO14796 132 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 GPX5O75715 221 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 RGS9O75916 674 aaPredicted RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 MAS1P04201 325 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 IGHV4-38-2P0DP08 117 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 MMP9P14780 707 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 GABRR1P24046 479 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 OR3A4PP47883 348 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 MTNR1BP49286 362 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 BMXP51813 675 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 MLLT11Q13015 90 aaPredicted RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 GPR50Q13585 617 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 ZNF146Q15072 292 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 RSU1Q15404 277 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 TBCEQ15813 527 aaPredicted RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 ACSM3Q53FZ2 586 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 GPR157Q5UAW9 335 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 KIR3DL3Q8N743 410 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 PXT1Q8NFP0 134 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 TBX15Q96SF7 602 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 S100A13Q99584 98 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 SLC6A7Q99884 636 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 MS4A7Q9GZW8 240 aaPredicted RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 EXOSC4Q9NPD3 245 aaKnown RBP12.36□□□□□ -0.43
IRF3-211ENST00000596644 ISYNA1Q9NPH2 558 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 NOX4Q9NPH5 578 aa12.36□□□□□ -0.43
IRF3-211ENST00000596644 MAGEA13PA6NCF6 341 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 SIRPB1O00241 398 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 PTGFRP43088 359 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 RPL31P62899 125 aaKnown RBP12.35□□□□□ -0.43
IRF3-211ENST00000596644 TPBGQ13641 420 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 BLMHQ13867 455 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 PDCD1Q15116 288 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 GDPD3Q7L5L3 318 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 ZNF367Q7RTV3 350 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 VMO1Q7Z5L0 202 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 JAGN1Q8N5M9 183 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 OR4M1Q8NGD0 313 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 OR5D13Q8NGL4 314 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 PPP1R35Q8TAP8 253 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 SNX22Q96L94 193 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 MGLLQ99685 303 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 SUCNR1Q9BXA5 334 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 YTHDF1Q9BYJ9 559 aaKnown RBP12.35□□□□□ -0.43
IRF3-211ENST00000596644 SEBOXQ9HB31 216 aaPredicted RBP12.35□□□□□ -0.43
IRF3-211ENST00000596644 C19orf12Q9NSK7 152 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 ZNF69Q9UC07 566 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 ING4Q9UNL4 249 aa12.35□□□□□ -0.43
IRF3-211ENST00000596644 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 TMEM82A0PJX8 343 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 PIN1P1O15428 100 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 MRPS14O60783 128 aaKnown RBP12.34□□□□□ -0.43
IRF3-211ENST00000596644 ZNF737O75373 536 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 CDRT1O95170 752 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 HTR3BO95264 441 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 ZNF44P15621 663 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 CPEP16870 476 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 EDDM3BP56851 147 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 SCN1BQ07699 218 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 EDDM3AQ14507 147 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 INSL4Q14641 139 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 GRK1Q15835 563 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
IRF3-211ENST00000596644 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
IRF3-211ENST00000596644 CEACAM19Q7Z692 300 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms