RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TLN2Q9Y4G6 2542 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 A0A0A6YYD4 124 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 TMEM14DPA8MWL7 114 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 SLC17A2O00624 439 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 CD5LO43866 347 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 PRKACAP17612 351 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 SDC2P34741 201 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 MTNR1BP49286 362 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 PIGYQ3MUY2 71 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 CYB5R2Q6BCY4 276 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 OR10K2Q6IF99 312 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 GLIPR1L1Q6UWM5 242 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 GDPGP1Q6ZNW5 385 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 ANKRD13BQ86YJ7 626 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 JAGN1Q8N5M9 183 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 C11orf42Q8N5U0 333 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 NKAIN3Q8N8D7 197 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 LY6G5BQ8NDX9 201 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
LIG1-210ENST00000596332 ELL3Q9HB65 397 aaPredicted RBP8.75□□□□□ -1.01
LIG1-210ENST00000596332 CKLFQ9UBR5 152 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 SSR3Q9UNL2 185 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 ING4Q9UNL4 249 aa8.75□□□□□ -1.01
LIG1-210ENST00000596332 MRPS28Q9Y2Q9 187 aaKnown RBP8.75□□□□□ -1.01
LIG1-210ENST00000596332 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 A0A0B4J203 849 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 TRAV24A0A0B4J272 114 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 PPIAL4CA0A0B4J2A2 164 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 SMIM30A4D0T7 59 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 IFITM5A6NNB3 132 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 FOXI3A8MTJ6 420 aaPredicted RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 B4DSR2 109 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 K7N7A8 449 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 GPR37O15354 613 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 TMPRSS2O15393 492 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 MAGEB3O15480 346 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 OR2H2O95918 312 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 MSMBP08118 114 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 SLC2A2P11168 524 aaPredicted RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 RPS2P15880 293 aaKnown RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 ZNF16P17020 682 aaPredicted RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 RPS19P39019 145 aaKnown RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 PITPNBP48739 271 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 GZMKP49863 264 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 CLDN12P56749 244 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 LCN2P80188 198 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 COL10A1Q03692 680 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 SMIM21Q3B7S5 101 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 C2orf76Q3KRA6 126 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 RTN4RL2Q86UN3 420 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 Q8IYB0 196 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 OR4S1Q8NGB4 309 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 FOXRED1Q96CU9 486 aaPredicted RBP8.74□□□□□ -1.01
LIG1-210ENST00000596332 GPER1Q99527 375 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 TMPRSS13Q9BYE2 586 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 METTL9Q9H1A3 318 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 IFT22Q9H7X7 185 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 LPAR2Q9HBW0 351 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 NEK6Q9HC98 313 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 DNAJB11Q9UBS4 358 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 OPN4Q9UHM6 478 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 GSTK1Q9Y2Q3 226 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 V9GY05 133 aa8.74□□□□□ -1.01
LIG1-210ENST00000596332 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.74□□□□□ -1.013e-7■■■■□ 25.5
LIG1-210ENST00000596332 MXRA5Q9NR99 2828 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 LOC100506127A0A0U1RQW1 187 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 KIR2DS1A0A191URI9 304 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 SLC33A1O00400 549 aaPredicted RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 AIREO43918 545 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 GABARAPO95166 117 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 HTR3BO95264 441 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 HAND1O96004 215 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 TGFAP01135 160 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 TK1P04183 234 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 CHRM2P08172 466 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OCMP0CE72 109 aaPredicted RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 RAB3BP20337 219 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 HTR2CP28335 458 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 RPL5P46777 297 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 GABRA2P47869 451 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OR3A1P47881 315 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 DVL1P1P54792 670 aaPredicted RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 RBM11P57052 281 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 NCS1P62166 190 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 LSM3P62310 102 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 IL13RA1P78552 427 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 PAX8Q06710 450 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 IKZF1Q13422 519 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 KCNJ8Q15842 424 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 SLC22A6Q4U2R8 563 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 SPIN3Q5JUX0 258 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 GPR107Q5VW38 600 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 Q71RC1 249 aaPredicted RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 BTN2A1Q7KYR7 527 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms