RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 MAS1P04201 325 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 MSMBP08118 114 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 TMEM225BP0DP42 221 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 PSG2P11465 335 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 ZNF16P17020 682 aaPredicted RBP16.09■□□□□ 0.17
PNKP-207ENST00000596014 SRMP19623 302 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 CALRP27797 417 aaKnown RBP16.09■□□□□ 0.17
PNKP-207ENST00000596014 SDC2P34741 201 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 HSD17B12Q53GQ0 312 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 CCDC190Q86UF4 302 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 SAXO1Q8IYX7 474 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 CENPSQ8N2Z9 138 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 ZSCAN4Q8NAM6 433 aaPredicted RBP16.09■□□□□ 0.17
PNKP-207ENST00000596014 PHYHIPQ92561 330 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 NKX3-1Q99801 234 aaPredicted RBP16.09■□□□□ 0.17
PNKP-207ENST00000596014 TCF7L1Q9HCS4 588 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 CTSZQ9UBR2 303 aa16.09■□□□□ 0.17
PNKP-207ENST00000596014 IGKV1D-17A0A075B6S4 117 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 BCL3P20749 454 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 ZFP36P26651 326 aaKnown RBP16.08■□□□□ 0.17
PNKP-207ENST00000596014 PITPNBP48739 271 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 IFITM3Q01628 133 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 ESCO2Q56NI9 601 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 ZNF841Q6ZN19 808 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 Q71RC1 249 aaPredicted RBP16.08■□□□□ 0.17
PNKP-207ENST00000596014 SNX29P2Q8IUI4 249 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 Q8IYB0 196 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 WDFY2Q96P53 400 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 DNTTIP1Q9H147 329 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 DAPK2Q9UIK4 370 aa16.08■□□□□ 0.17
PNKP-207ENST00000596014 RFPL4AA6NLU0 287 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 RFPL4AL1F8VTS6 287 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 PHF1O43189 567 aaPredicted RBP16.08■□□□□ 0.16
PNKP-207ENST00000596014 FOXH1O75593 365 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 TFF1P04155 84 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 GABRA2P47869 451 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 LCN2P80188 198 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 ZNF788Q6ZQV5 615 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 SLC36A1Q7Z2H8 476 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 C1QL2Q7Z5L3 287 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 TNFAIP8L1Q8WVP5 186 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 SSBP3Q9BWW4 388 aaPredicted RBP16.08■□□□□ 0.16
PNKP-207ENST00000596014 RBFOX1Q9NWB1 397 aaKnown RBP16.08■□□□□ 0.16
PNKP-207ENST00000596014 CLN8Q9UBY8 286 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 ZNF222Q9UK12 451 aa16.08■□□□□ 0.16
PNKP-207ENST00000596014 ANK3Q12955 4377 aaKnown RBP16.08■□□□□ 0.16
PNKP-207ENST00000596014 A0A1B0GW55 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 MEGF11A6BM72 1044 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 CTDSP2O14595 271 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 UPK1BO75841 260 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 ARL6IP5O75915 188 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 KDM4BO94953 1096 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 KNG1P01042 644 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 SFTPBP07988 381 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L2P0CJ85 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L3P0CJ86 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L4P0CJ87 422 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L5P0CJ88 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L6P0CJ89 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L7P0CJ90 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 ADRA2CP18825 462 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 PTGFRP43088 359 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 OR3A4PP47883 348 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 GNB2P62879 340 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 SPANXN2Q5MJ10 180 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 WDR25Q64LD2 544 aaPredicted RBP16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4L9Q6RFH8 374 aaPredicted RBP16.07■□□□□ 0.16
PNKP-207ENST00000596014 CDH26Q8IXH8 852 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 PNLDC1Q8NA58 520 aaKnown RBP16.07■□□□□ 0.16
PNKP-207ENST00000596014 PXT1Q8NFP0 134 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 AP3S1Q92572 193 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 DUX4Q9UBX2 424 aa16.07■□□□□ 0.16
PNKP-207ENST00000596014 SMIM30A4D0T7 59 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 KIAA1324LA8MWY0 1029 aaPredicted RBP16.06■□□□□ 0.16
PNKP-207ENST00000596014 A8MXK9 166 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 PRDX2P32119 198 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 FAM166AQ6J272 317 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 ASCL4Q6XD76 172 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 LRRTM1Q86UE6 522 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 LYPD6Q86Y78 171 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 LURAP1LQ8IV03 231 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 LAX1Q8IWV1 398 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 FAM58AQ8N1B3 248 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 JAGN1Q8N5M9 183 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 FAM216BQ8N7L0 139 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 NKAIN3Q8N8D7 197 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 MINDY2Q8NBR6 621 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 EMG1Q92979 244 aaKnown RBP16.06■□□□□ 0.16
PNKP-207ENST00000596014 TMEM186Q96B77 213 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 GAFA1Q96PS6 74 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 RHOFQ9HBH0 211 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 YAE1D1Q9NRH1 226 aa16.06■□□□□ 0.16
PNKP-207ENST00000596014 NIPBLQ6KC79 2804 aaeCLIP16.05■□□□□ 0.16
PNKP-207ENST00000596014 NKX6-3A6NJ46 265 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 DVL1O14640 695 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 RGS5O15539 181 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 FCN3O75636 299 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 CALCBP10092 127 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 NPY4RP50391 375 aa16.05■□□□□ 0.16
PNKP-207ENST00000596014 DVL1P1P54792 670 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms