RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 CPEP16870 476 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 EPHA1P21709 976 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF93P35789 620 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 DLX1P56177 255 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 CAV3P56539 151 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ARF6P62330 175 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 MLLT11Q13015 90 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 TPBGQ13641 420 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 UNQ9370/PRO34162Q6UXP9 181 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 Q8IYB0 196 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 SAXO1Q8IYX7 474 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF561Q8N587 486 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ASCC1Q8N9N2 400 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 PNLDC1Q8NA58 520 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ZSCAN4Q8NAM6 433 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 OR4M1Q8NGD0 313 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 NANPQ8TBE9 248 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 C22orf15Q8WYQ4 148 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 UPRTQ96BW1 309 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 TBX15Q96SF7 602 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 PCGF1Q9BSM1 259 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 SIRPDQ9H106 197 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 C19orf12Q9NSK7 152 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ONECUT1Q9UBC0 465 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 CKLFQ9UBR5 152 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 GSTK1Q9Y2Q3 226 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 MEX3AA1L020 520 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 SIRPB1O00241 398 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF737O75373 536 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 TK1P04183 234 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 PPIAL4GP0DN37 164 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 MMP9P14780 707 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 PDCD1Q15116 288 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 SSX1Q16384 188 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 TMEM91Q6ZNR0 172 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 CEACAM19Q7Z692 300 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 PHC2Q8IXK0 858 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 BCL6BQ8N143 479 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 MS4A15Q8N5U1 240 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 WDFY2Q96P53 400 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 CHST6Q9GZX3 395 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 CNTD2Q9H8S5 307 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 ISYNA1Q9NPH2 558 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 FOXJ3Q9UPW0 622 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 SF3B6Q9Y3B4 125 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 KIAA2026Q5HYC2 2103 aa11.36□□□□□ -0.59
SHKBP1-207ENST00000595631 A0A1W2PQ09 198 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 K7N7A8 449 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 GPR37O15354 613 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 PSPNO60542 156 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 SC5DO75845 299 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 TOX4O94842 621 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 HTR3BO95264 441 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 CHRM2P08172 466 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 PTGFRP43088 359 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 SCN1BQ07699 218 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 GPR50Q13585 617 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF146Q15072 292 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 RUSC1-AS1Q66K80 236 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 C17orf107Q6ZR85 190 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 JAGN1Q8N5M9 183 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 MUL1Q969V5 352 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 CPNE2Q96FN4 548 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 NR1H4Q96RI1 486 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 SLC6A7Q99884 636 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF581Q9P0T4 197 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 ZNF69Q9UC07 566 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 ING4Q9UNL4 249 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 JMJD1CQ15652 2540 aa11.35□□□□□ -0.59
SHKBP1-207ENST00000595631 A0A1W2PP11 408 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 OR2H2O95918 312 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 LIPFP07098 398 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 SERPINA2P20848 420 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 GABRR1P24046 479 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 MAPK3P27361 379 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 MTNR1BP49286 362 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 FABP5Q01469 135 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 RSU1Q15404 277 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 PIGYQ3MUY2 71 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 SPIN3Q5JUX0 258 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 METTL11BQ5VVY1 283 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 Q6P435 159 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 ASCL4Q6XD76 172 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 BRD3OSQ6XYD6 125 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 LRRTM1Q86UE6 522 aa11.34□□□□□ -0.59
SHKBP1-207ENST00000595631 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms