RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-242	ENST00000593093	CFAP54	Q96N23	3096 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	IGHV3-15	A0A0B4J1V0	119 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	ALG1L2	C9J202	215 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	NPS	P0C0P6	89 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	PNLIP	P16233	465 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	ATP6V0C	P27449	155 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	FGF8	P55075	233 aa	Predicted RBP	12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	RND3	P61587	244 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	MRPS34	P82930	218 aa	Known RBP	12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	UBE2V2	Q15819	145 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	SLC38A9	Q8NBW4	561 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	PLPP5	Q8NEB5	264 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	PLEK2	Q9NYT0	353 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	HS3ST3B1	Q9Y662	390 aa		12.5	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR5H15	A6NDH6	313 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HMGB3	O15347	200 aa	Known RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	PGA4	P0DJD7	388 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	PGA5	P0DJD9	388 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	ERVFRD-1	P60508	538 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	PRAMEF20	Q5VT98	475 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	TMEM92	Q6UXU6	159 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	TCTN2	Q96GX1	697 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	WFIKKN1	Q96NZ8	548 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	METTL7A	Q9H8H3	244 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	CACNA1D	Q01668	2161 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	IGKV1-9	A0A0C4DH69	117 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093		G3V3Y1	287 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	ZNF41	P51814	821 aa	Predicted RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	RPS18	P62269	152 aa	Known RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	C2orf88	Q9BSF0	95 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	LHFPL6	Q9Y693	200 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	POMT1	Q9Y6A1	747 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HSPA12A	O43301	675 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	PPIH	O43447	177 aa	Known RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BK	O60814	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	IGHG1	P01857	330 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BJ	P06899	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	MMP7	P09237	267 aa	Predicted RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BO	P23527	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	FCAR	P24071	287 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BB	P33778	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BD	P58876	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BC	P62807	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST2H2BE	Q16778	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	ZNF695	Q8IW36	515 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR5C1	Q8NGR4	320 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BH	Q93079	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	KLHDC7B	Q96G42	594 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BN	Q99877	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	HIST1H2BM	Q99879	126 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	EGLN1	Q9GZT9	426 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	WNT16	Q9UBV4	365 aa		12.49	□□□□□ -0.41
CIRBP-242	ENST00000593093	GPR137B	O60478	399 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	TRGC1	P0CF51	173 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	FBL	P22087	321 aa	Known RBP	12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	P2RY1	P47900	373 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	CLDN17	P56750	224 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	RAB1A	P62820	205 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	MPV17L	Q2QL34	196 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	HEPN1	Q6WQI6	88 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	THNSL2	Q86YJ6	484 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR14L1P	Q8NHC6	308 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	NTNG2	Q96CW9	530 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	DDIT4L	Q96D03	193 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	IFITM10	A6NMD0	228 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR7C1	O76099	320 aa	Predicted RBP	12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	DDAH2	O95865	285 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	MYBPH	Q13203	477 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	CMTM1	Q8IZ96	169 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	LGI3	Q8N145	548 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	ARHGEF39	Q8N4T4	335 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	PACRG	Q96M98	296 aa	Predicted RBP	12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	ZNF407	Q9C0G0	2248 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	FAM157A	C9JC47	383 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR2J2	O76002	312 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	CNOT4	O95628	575 aa	Known RBP	12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	CLPS	P04118	112 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	SEC11B	P0C7V7	166 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	ZNF721	Q8TF20	911 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	ADIPOR1	Q96A54	375 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	FAM210B	Q96KR6	192 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	KCNK17	Q96T54	332 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	CHST5	Q9GZS9	411 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	TP53TG5	Q9Y2B4	290 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	HDGFL3	Q9Y3E1	203 aa		12.48	□□□□□ -0.41
CIRBP-242	ENST00000593093	NKX2-6	A6NCS4	301 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	OR5H1	A6NKK0	313 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	SRSF10	O75494	262 aa	Known RBP	12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	GAPDH	P04406	335 aa	Known RBP	12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	RPS2	P15880	293 aa	Known RBP	12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	DUSP1	P28562	367 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	APOBEC1	P41238	236 aa	Known RBP	12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	HSD11B2	P80365	405 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	WDR25	Q64LD2	544 aa	Predicted RBP	12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	TAAR9	Q96RI9	348 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	CCDC187	A0A096LP49	1063 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093		E9PLN8	166 aa		12.47	□□□□□ -0.41
CIRBP-242	ENST00000593093	MASP2	O00187	686 aa		12.47	□□□□□ -0.41

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