RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 GSTK1Q9Y2Q3 226 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 MRPS28Q9Y2Q9 187 aaKnown RBP12.4□□□□□ -0.42
DDX39A-221ENST00000593026 MAB21L2Q9Y586 359 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 FCN3O75636 299 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 CDRT1O95170 752 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 HAND1O96004 215 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 DUSP1P28562 367 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 MTNR1BP49286 362 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 BMXP51813 675 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 CAPZA1P52907 286 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 FGF12P61328 243 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 ZNF146Q15072 292 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 GLT8D1Q68CQ7 371 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 FGFRL1Q8N441 504 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-221ENST00000593026 UQCC2Q9BRT2 126 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 CNTD2Q9H8S5 307 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 EXOSC4Q9NPD3 245 aaKnown RBP12.39□□□□□ -0.43
DDX39A-221ENST00000593026 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 STUB1Q9UNE7 303 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
DDX39A-221ENST00000593026 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 MTORP42345 2549 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 C22orf46C9J442 243 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 J3QLI3 93 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 GPR37O15354 613 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 ENSAO43768 121 aaKnown RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 ECDO95905 644 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 CHRM2P08172 466 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 NDUFB7P17568 137 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 HNF1AP20823 631 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 CAV3P56539 151 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 COL10A1Q03692 680 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 C22orf42Q6IC83 251 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 BTNL3Q6UXE8 466 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 ASCC1Q8N9N2 400 aaKnown RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 OR10K1Q8NGX5 313 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 RAB40AQ8WXH6 277 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 H1FXQ92522 213 aaKnown RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 NUDT16L1Q9BRJ7 211 aaKnown RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 PCDHB16Q9NRJ7 776 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 SSR3Q9UNL2 185 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 INSIG2Q9Y5U4 225 aa12.38□□□□□ -0.43
DDX39A-221ENST00000593026 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-221ENST00000593026 SH2D1BO14796 132 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 HTR3BO95264 441 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 CD36P16671 472 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 JUNBP17275 347 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-221ENST00000593026 SERPINA2P20848 420 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 MYL9P24844 172 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 PAX2Q02962 417 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 GPR176Q14439 515 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 SLC22A6Q4U2R8 563 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 FAM120AOSQ5T036 256 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 GLIPR1L1Q6UWM5 242 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 Q8NFD4 153 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 TBC1D15Q8TC07 691 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 DACT3Q96B18 629 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-221ENST00000593026 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 TMPRSS13Q9BYE2 586 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 RPUSD1Q9UJJ7 312 aaKnown RBP12.37□□□□□ -0.43
DDX39A-221ENST00000593026 ARHGAP32A7KAX9 2087 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 DOCK11Q5JSL3 2073 aa12.37□□□□□ -0.43
DDX39A-221ENST00000593026 TRAV1-2A0A0B4J238 106 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 KIR2DS1A0A191URI9 304 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 PDCD5O14737 125 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 ZNF737O75373 536 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 TK1P04183 234 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 ZNF44P15621 663 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 GADD45AP24522 165 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 FGF9P31371 208 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-221ENST00000593026 SCN1BQ07699 218 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 KRTAP21-3Q3LHN1 58 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 C1orf100Q5SVJ3 147 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 IL17RELQ6ZVW7 336 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 OR51T1Q8NGJ9 327 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 SNX22Q96L94 193 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 DCTN5Q9BTE1 182 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 OR51E2Q9H255 320 aa12.36□□□□□ -0.43
DDX39A-221ENST00000593026 C7orf69Q9H7B7 122 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms