RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 INPP5EQ9NRR6 644 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 MRPS18AQ9NVS2 196 aaKnown RBP11.3□□□□□ -0.6
APOC1-208ENST00000592535 RPL36Q9Y3U8 105 aaKnown RBP11.3□□□□□ -0.6
APOC1-208ENST00000592535 IGKV1-12A0A0C4DH73 117 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 TRBV2A0A0J9YWF9 115 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 hCG_1809904A0A1W2PP81 198 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 A0A1W2PPE2 198 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 A0A1W2PR64 198 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 A0A1W2PRV1 198 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 H3BUX3 64 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 ZFPL1O95159 310 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 CYB5AP00167 134 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 IGKV1D-12P01611 117 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 OCM2P0CE71 109 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 PRKACAP17612 351 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 PDZK1IP1Q13113 114 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 EDDM3AQ14507 147 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 DHRS7BQ6IAN0 325 aaPredicted RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 TCF23Q7RTU1 214 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 ZSCAN4Q8NAM6 433 aaPredicted RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 OR52N4Q8NGI2 321 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 OR5D18Q8NGL1 313 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 OR5R1Q8NH85 324 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 RDH12Q96NR8 316 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 MYCBPQ99417 103 aaPredicted RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 SSX3Q99909 188 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 CHST6Q9GZX3 395 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
APOC1-208ENST00000592535 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
APOC1-208ENST00000592535 PSPNO60542 156 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 CLIC3O95833 236 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 MT-ND2P03891 347 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 LIMS3P0CW19 117 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 LIMS4P0CW20 117 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 ZNF728P0DKX0 622 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
APOC1-208ENST00000592535 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
APOC1-208ENST00000592535 ZNF146Q15072 292 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 LRRC36Q1X8D7 754 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 KLHL22Q53GT1 634 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 OR4S1Q8NGB4 309 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 OR5AK2Q8NH90 309 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 ZCCHC4Q9H5U6 513 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 SEBOXQ9HB31 216 aaPredicted RBP11.28□□□□□ -0.6
APOC1-208ENST00000592535 HMG20AQ9NP66 347 aa11.28□□□□□ -0.6
APOC1-208ENST00000592535 FGF20Q9NP95 211 aaPredicted RBP11.28□□□□□ -0.6
APOC1-208ENST00000592535 TMEM212A6NML5 194 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 SIRPB1O00241 398 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 KDM4BO94953 1096 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 CCDC159P0C7I6 412 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 GABRR1P24046 479 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 PEX2P28328 305 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
APOC1-208ENST00000592535 RCN1Q15293 331 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 GRK1Q15835 563 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 LY6EQ16553 131 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 SPIN3Q5JUX0 258 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 ZNF691Q5VV52 312 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 LPCAT4Q643R3 524 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 LHFPL4Q7Z7J7 247 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 CNIH3Q8TBE1 160 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 TSEN15Q8WW01 171 aaKnown RBP11.27□□□□□ -0.61
APOC1-208ENST00000592535 ZNF714Q96N38 554 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 CITED1Q99966 193 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 PPA2Q9H2U2 334 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 DHDHQ9UQ10 334 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
APOC1-208ENST00000592535 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 SULT1B1O43704 296 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 TSPAN9O75954 239 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 CLPXO76031 633 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 HCKP08631 526 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 TGFBR2P37173 567 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 OR3A1P47881 315 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 ETV1P50549 477 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 LGALS4P56470 323 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 PROK1P58294 105 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
APOC1-208ENST00000592535 IL18R1Q13478 541 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 XAF1Q6GPH4 301 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 SERPINA12Q8IW75 414 aa11.26□□□□□ -0.61
APOC1-208ENST00000592535 PARP16Q8N5Y8 322 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms