RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 H0YIZ8 118 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 KCNAB3O43448 404 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 IFNA2P01563 188 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 IGHG3P01860 377 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 ZNF250P15622 560 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 MDP1Q86V88 176 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 OR5A2Q8NGI9 324 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 HS3ST6Q96QI5 342 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 DHRS9Q9BPW9 319 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 REG4Q9BYZ8 158 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 C12orf4Q9NQ89 552 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A10PA6NDY2 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A18PA6NE21 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A16PA6NEW6 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A20PA6NIJ5 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A8PA6NJQ4 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A7PA6NKC0 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A22PA8MWA6 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A12PA8MX19 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A5PA8MXJ8 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A23PA8MXZ1 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A15PP0C7V4 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A13PP0C7W8 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A14PP0C7W9 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 FAM90A24PP0C7X0 464 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 BHLHE23Q8NDY6 225 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 ZNF442Q9H7R0 627 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 MTCH1Q9NZJ7 389 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 hCG_1807616A0A1W2PRN6 198 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 CRYM-AS1A6NIL9 109 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 WISP2O76076 250 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 PLEKHN1Q494U1 663 aaPredicted RBP16.92■□□□□ 0.3
MBD3-209ENST00000592012 NANOS1Q8WY41 292 aaKnown RBP16.92■□□□□ 0.3
MBD3-209ENST00000592012 ZNF286AQ9HBT8 521 aa16.92■□□□□ 0.3
MBD3-209ENST00000592012 ZNF292O60281 2723 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 LILRA1O75019 489 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 LUMP51884 338 aaPredicted RBP16.91■□□□□ 0.3
MBD3-209ENST00000592012 NUBP1P53384 320 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 FGF12P61328 243 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 IL15RAQ13261 267 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 CCDC28AQ8IWP9 274 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 SGPP2Q8IWX5 399 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 SLC30A7Q8NEW0 376 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 RBPMSQ93062 196 aaKnown RBP16.91■□□□□ 0.3
MBD3-209ENST00000592012 C2orf50Q96LR7 162 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 PTPRBP23467 1997 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 HOXB5P09067 269 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 P4HA3Q7Z4N8 544 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 OR5P3Q8WZ94 311 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 DCUN1D4Q92564 292 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 HIST1H2AAQ96QV6 131 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 ZNF471Q9BX82 626 aaPredicted RBP16.91■□□□□ 0.3
MBD3-209ENST00000592012 C1orf123Q9NWV4 160 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 SDHAF2Q9NX18 166 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 CLCF1Q9UBD9 225 aa16.91■□□□□ 0.3
MBD3-209ENST00000592012 LAMA5O15230 3695 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 MFSD2BA6NFX1 497 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 SHOXO15266 292 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 FCGR2CP31995 323 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 RBMXP38159 391 aaKnown RBP16.9■□□□□ 0.3
MBD3-209ENST00000592012 PDZD9Q8IXQ8 264 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 POC1AQ8NBT0 407 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 OR1S1Q8NH92 325 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
MBD3-209ENST00000592012 OR51B6Q9H340 312 aa16.9■□□□□ 0.3
MBD3-209ENST00000592012 RIF1Q5UIP0 2472 aaKnown RBP16.9■□□□□ 0.3
MBD3-209ENST00000592012 PRSS44E7EML9 344 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 ZNF728P0DKX0 622 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 LYL1P12980 280 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 PIGPP57054 158 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 IGF2-ASQ6U949 168 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 MKXQ8IYA7 352 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.3
MBD3-209ENST00000592012 OR5L1Q8NGL2 311 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 TOMM40LQ969M1 308 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 GLRX2Q9NS18 164 aa16.89■□□□□ 0.3
MBD3-209ENST00000592012 ESPL1Q14674 2120 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 TEX13DA0A0J9YY54 714 aaPredicted RBP16.89■□□□□ 0.29
MBD3-209ENST00000592012 ANKRD30BLA7E2S9 258 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 RBM39Q14498 530 aaKnown RBP16.89■□□□□ 0.29
MBD3-209ENST00000592012 TFAP2EQ6VUC0 442 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 EXTL1Q92935 676 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 C1QTNF6Q9BXI9 259 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 SLC25A32Q9H2D1 315 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 RASL12Q9NYN1 266 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 IL36RNQ9UBH0 155 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 MPC1Q9Y5U8 109 aa16.89■□□□□ 0.29
MBD3-209ENST00000592012 SYNGR1O43759 233 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 PRSS54Q6PEW0 395 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 GCNT2Q8N0V5 402 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 ARPC5LQ9BPX5 153 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 TRAPPC2LH3BP13 241 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 ZNF14P17017 642 aaPredicted RBP16.88■□□□□ 0.29
MBD3-209ENST00000592012 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 IL32P24001 234 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 MYPOPQ86VE0 399 aaPredicted RBP16.88■□□□□ 0.29
MBD3-209ENST00000592012 SLX1AQ9BQ83 275 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 OR5AC2Q9NZP5 309 aa16.88■□□□□ 0.29
MBD3-209ENST00000592012 RCC2Q9P258 522 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms