RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SIRT7Q9NRC8 400 aa9.48□□□□□ -0.89
VMP1-211ENST00000591315 ZNF581Q9P0T4 197 aa9.48□□□□□ -0.89
VMP1-211ENST00000591315 ERGIC3Q9Y282 383 aa9.48□□□□□ -0.89
VMP1-211ENST00000591315 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 A0A1W2PRD5 423 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 A0A1W2PRF3 423 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 A0A1W2PRM7 423 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 RNF212BA8MTL3 300 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 TCF21O43680 179 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 ALX3O95076 343 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 HAND1O96004 215 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 IGFBP3P17936 291 aaPredicted RBP9.47□□□□□ -0.89
VMP1-211ENST00000591315 RAB3AP20336 220 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 OR3A4PP47883 348 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 HSPA13P48723 471 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 GP2P55259 537 aaKnown RBP9.47□□□□□ -0.89
VMP1-211ENST00000591315 CAV3P56539 151 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 FAM27D1Q5T7N8 215 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 RNLSQ5VYX0 342 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 METAP1DQ6UB28 335 aaPredicted RBP9.47□□□□□ -0.89
VMP1-211ENST00000591315 VMO1Q7Z5L0 202 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 FAM185AQ8N0U4 392 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 BPIFB2Q8N4F0 458 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 ASCC1Q8N9N2 400 aaKnown RBP9.47□□□□□ -0.89
VMP1-211ENST00000591315 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 MND1Q9BWT6 205 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 CCDC90BQ9GZT6 254 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 CHST6Q9GZX3 395 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 PPIL3Q9H2H8 161 aaKnown RBP9.47□□□□□ -0.89
VMP1-211ENST00000591315 HMG20AQ9NP66 347 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 RAB26Q9ULW5 256 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 GSTK1Q9Y2Q3 226 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 TPRKBQ9Y3C4 175 aa9.47□□□□□ -0.89
VMP1-211ENST00000591315 A0A1W2PQ09 198 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 K7N7A8 449 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 SIRPB1O00241 398 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 RGS10O43665 173 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 PSPNO60542 156 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 KDM4BO94953 1096 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 CDRT1O95170 752 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 TK1P04183 234 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 CD2P06729 351 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 LIPFP07098 398 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 CCL3L1P16619 93 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 ZNF273Q14593 569 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 SPHARQ15513 63 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 MED22Q15528 200 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 Q499Y3 187 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 METTL11BQ5VVY1 283 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 TMEM200BQ69YZ2 307 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 C17orf107Q6ZR85 190 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 PHC2Q8IXK0 858 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 ZNF561Q8N587 486 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 TPRX1Q8N7U7 411 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 ZDHHC22Q8N966 263 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 OR4S1Q8NGB4 309 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 TNFAIP8L1Q8WVP5 186 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
VMP1-211ENST00000591315 CYYR1Q96J86 154 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.9
VMP1-211ENST00000591315 DERL3Q96Q80 235 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 ZNF184Q99676 751 aaPredicted RBP9.46□□□□□ -0.9
VMP1-211ENST00000591315 TMED9Q9BVK6 235 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 MS4A7Q9GZW8 240 aaPredicted RBP9.46□□□□□ -0.9
VMP1-211ENST00000591315 NOX4Q9NPH5 578 aa9.46□□□□□ -0.9
VMP1-211ENST00000591315 A0A1W2PP11 408 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 RNASEK-C17orf49H0YIS7 233 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 CYB5AP00167 134 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 CHRM2P08172 466 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 FPR2P25090 351 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 BDKRB2P30411 391 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 TGFBR2P37173 567 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 OR3A1P47881 315 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 TAS2R43P59537 309 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 RPL31P62899 125 aaKnown RBP9.45□□□□□ -0.9
VMP1-211ENST00000591315 SCN1BQ07699 218 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 ACSM1Q08AH1 577 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 DDI2Q5TDH0 399 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 Q6P435 159 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 TCF23Q7RTU1 214 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 C11orf42Q8N5U0 333 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 TEX29Q8N6K0 151 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.45□□□□□ -0.9
VMP1-211ENST00000591315 ZNF418Q8TF45 676 aaPredicted RBP9.45□□□□□ -0.9
VMP1-211ENST00000591315 TNFRSF14Q92956 283 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 TMEM203Q969S6 136 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
VMP1-211ENST00000591315 GPER1Q99527 375 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 FAM192AQ9GZU8 254 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 ING4Q9UNL4 249 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 KPTNQ9Y664 436 aa9.45□□□□□ -0.9
VMP1-211ENST00000591315 IGHV1-69DA0A0B4J2H0 117 aa9.44□□□□□ -0.9
VMP1-211ENST00000591315 GPX5O75715 221 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms