RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 UFSP2Q9NUQ7 469 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 RNF150Q9ULK6 438 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 SPINT2O43291 252 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 DAOP14920 347 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 P2RY1P47900 373 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 FGF11Q92914 225 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 SLC2A9Q9NRM0 540 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 LOC105371267A0A1B0GV96 52 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 HIPK2Q9H2X6 1198 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 CACNA1IQ9P0X4 2223 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 CCDC187A0A096LP49 1063 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 CRYBA1P05813 215 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 CALCRP30988 508 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 RNF212Q495C1 297 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 TMEM178AQ8NBL3 297 aa15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 RPUSD4Q96CM3 377 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-215ENST00000590574 CDK2AP1O14519 115 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 ANKRD55Q3KP44 614 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 ACER2Q5QJU3 275 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 TBC1D26Q86UD7 250 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 HEYLQ9NQ87 328 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SERTAD4Q9NUC0 356 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 MMP24Q9Y5R2 645 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC10A1Q14973 349 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 ARV1Q9H2C2 271 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 TMEM100Q9NV29 134 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 DUSP13Q9UII6 198 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 ERRFI1Q9UJM3 462 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 TDRD6O60522 2096 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 MUC1P15941 1255 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 MEOX2P50222 304 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 OR4F5Q8NH21 305 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 OR4F4Q96R69 305 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 C5orf66Q9H5L9 145 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 PARP11Q9NR21 331 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 CD8AP01732 235 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 CST2P09228 141 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SPINK2P20155 84 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 FABP9Q0Z7S8 132 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC25A47Q6Q0C1 308 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 M1APQ8TC57 530 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SCGB1D1O95968 90 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 ARG1P05089 322 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 OR8U8P0C7N1 319 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 SPP1P10451 314 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 EDDM3BP56851 147 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 RSRP1Q9BUV0 290 aa15.01□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A1B0GTQ1 180 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A1W2PNV4 684 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 hCG_1809904A0A1W2PP81 198 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A1W2PR64 198 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A1W2PRV1 198 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 MPPED1O15442 326 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 VOPP1Q96AW1 172 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 SF3B5Q9BWJ5 86 aaKnown RBP15□□□□□ -0.01
SMARCA4-215ENST00000590574 P4HTMQ9NXG6 502 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 WSB1Q9Y6I7 421 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 LIFP15018 202 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC39A7Q92504 469 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 OR10C1Q96KK4 312 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 CABLES2Q9BTV7 478 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC2A8Q9NY64 477 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 PLA2G3Q9NZ20 509 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 KLF13Q9Y2Y9 288 aaPredicted RBP15□□□□□ -0.01
SMARCA4-215ENST00000590574 H7BYZ3 331 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 CCL4P13236 92 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 KITLGP21583 273 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 TRA2AQ13595 282 aaKnown RBP eCLIP15□□□□□ -0.018e-8■■■□□ 15.5
SMARCA4-215ENST00000590574 SMIM7Q9BQ49 75 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 NRIP2Q9BQI9 281 aa15□□□□□ -0.01
SMARCA4-215ENST00000590574 IGKV1D-43A0A0B4J1Z2 117 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 CELA2AP08217 269 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 UNC119Q13432 240 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 OR10P1Q8NGE3 313 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 FAM173AQ9BQD7 235 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 UBE2L5PA0A1B0GUS4 154 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 CLEC18AA5D8T8 446 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 PPP5D1E7EU14 171 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 MFNGO00587 321 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 CLEC18CQ8NCF0 446 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 PPYP01298 95 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 LINC00271P0C7V0 271 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 SELEP16581 610 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 DTYMKP23919 212 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 P2RY4P51582 365 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 CCL11P51671 97 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 ZNF816Q0VGE8 651 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 OR2T2Q6IF00 324 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 SSX9Q7RTT3 188 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 ERGIC1Q969X5 290 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 OR2H1Q9GZK4 316 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 BCL3P20749 454 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 DYNLT3P51808 116 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 GNG3P63215 75 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 OR1C1Q15619 314 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC16A13Q7RTY0 426 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC25A45Q8N413 288 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 HEXA-AS1Q9H8Q6 139 aa14.99□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A0U1RQV5 110 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms