RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MPTX1A8MV57 137 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 TAAR5O14804 337 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SS18L1O75177 396 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 OR7C1O76099 320 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 APLNRP35414 380 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 FOXG1P55316 489 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SOX8P57073 446 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 ARG2P78540 354 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SMCO1Q147U7 214 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SRSF7Q16629 238 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 IAH1Q2TAA2 248 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SLC38A6Q8IZM9 456 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 OR5A2Q8NGI9 324 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 RRNAD1Q96FB5 475 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 GALNT14Q96FL9 552 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 SUCNR1Q9BXA5 334 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 NAA60Q9H7X0 242 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 OR5AC2Q9NZP5 309 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 STARD10Q9Y365 291 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 TNRC6AQ8NDV7 1962 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 AHCTF1Q8WYP5 2266 aa16.51■□□□□ 0.23
PRKCSH-209ENST00000589838 TRGV5A0A0B4J1U4 118 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 FCGR2CP31995 323 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF766Q5HY98 468 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 BRICD5Q6PL45 260 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 OR5L1Q8NGL2 311 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 TOMM40LQ969M1 308 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 CNTNAP3BQ96NU0 1288 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 TAS2R3Q9NYW6 316 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 FREM1Q5H8C1 2179 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 ARHGAP21Q5T5U3 1957 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 ARGFXA6NJG6 315 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 SCO1O75880 301 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 CCL2P13500 99 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 S100A10P60903 97 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 FGF12P61328 243 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 TUSC1Q2TAM9 212 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 Q6ZS49 121 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 CCDC71LQ8N9Z2 235 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 DYRK2Q92630 601 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 MOB3AQ96BX8 217 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 WDYHV1Q96HA8 205 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 DEFB127Q9H1M4 99 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 PIGMQ9H3S5 423 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 BARX1Q9HBU1 254 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 PLSCR2Q9NRY7 297 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 TUBD1Q9UJT1 453 aa16.5■□□□□ 0.23
PRKCSH-209ENST00000589838 KNTC1P50748 2209 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 TRAPPC2LH3BP13 241 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 HAAOP46952 286 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 NPBWR2P48146 333 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 GPM6AP51674 278 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 HERV-K104P61576 105 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 C3AR1Q16581 482 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 MPV17LQ2QL34 196 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 TFAP2EQ6VUC0 442 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 OR1K1Q8NGR3 316 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 RTN4IP1Q8WWV3 396 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 SLAMF9Q96A28 289 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 LIME1Q9H400 295 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 CYTL1Q9NRR1 136 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF175Q9Y473 711 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 MPC1Q9Y5U8 109 aa16.49■□□□□ 0.23
PRKCSH-209ENST00000589838 FAM221AA4D161 298 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 SLC22A20A6NK97 555 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ANKRD30BLA7E2S9 258 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF732B4DXR9 585 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 LGALS8O00214 317 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 FGF16O43320 207 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 KCNAB3O43448 404 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 BCL3P20749 454 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 FXYD4P59646 89 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 CLN3Q13286 438 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 FBXW9Q5XUX1 488 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 GGNBP1Q5YKI7 109 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF585AQ6P3V2 769 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 GLRX5Q86SX6 157 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 LRTM2Q8N967 370 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 RNF141Q8WVD5 230 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 EXTL1Q92935 676 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 PLK3Q9H4B4 646 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ZFP57Q9NU63 452 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 SPEF1Q9Y4P9 236 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 LIPGQ9Y5X9 500 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 VPS13AQ96RL7 3174 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ZNF503-AS2A6NEH8 195 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 CD300LBA8K4G0 201 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 NUDT19A8MXV4 375 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 TMEM187Q14656 261 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 EIF5AL1Q6IS14 154 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 UQCC3Q6UW78 93 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 LINC00596Q86U02 117 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 STPG2Q8N412 459 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 HPSE2Q8WWQ2 592 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 BCL2L2Q92843 193 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 MARS2Q96GW9 593 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 MICU1Q9BPX6 476 aa16.48■□□□□ 0.23
PRKCSH-209ENST00000589838 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms