RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 KNG1P01042 644 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 NGFP01138 241 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 RPS2P15880 293 aaKnown RBP13.13□□□□□ -0.31
MBD1-217ENST00000588937 OPRM1P35372 400 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 RBMXP38159 391 aaKnown RBP13.13□□□□□ -0.31
MBD1-217ENST00000588937 MPV17LQ2QL34 196 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 MDP1Q86V88 176 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 FAM122AQ96E09 287 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 PLK3Q9H4B4 646 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 MED9Q9NWA0 146 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 ZNF407Q9C0G0 2248 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 FREM1Q5H8C1 2179 aa13.13□□□□□ -0.31
MBD1-217ENST00000588937 A0A1B0GW55 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 TRAPPC2LH3BP13 241 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 PET100P0DJ07 73 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 BCL3P20749 454 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 UBE2NP61088 152 aaKnown RBP13.12□□□□□ -0.31
MBD1-217ENST00000588937 SRSF6Q13247 344 aaKnown RBP13.12□□□□□ -0.31
MBD1-217ENST00000588937 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
MBD1-217ENST00000588937 ANKRD55Q3KP44 614 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 ZNF573Q86YE8 665 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 SLAMF9Q96A28 289 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 C2orf50Q96LR7 162 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 DNAJC13O75165 2243 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 MSTNO14793 375 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 CNOT4O95628 575 aaKnown RBP13.12□□□□□ -0.31
MBD1-217ENST00000588937 WNT5AP41221 380 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 GLP1RP43220 463 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 NPBWR2P48146 333 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 P2RX3P56373 397 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 ST8SIA2Q92186 375 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 SARAFQ96BY9 339 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 PIK3IP1Q96FE7 263 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 KCNIP3Q9Y2W7 256 aa13.12□□□□□ -0.31
MBD1-217ENST00000588937 TRBV6-7A0A0A0MS04 114 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 TEX13DA0A0J9YY54 714 aaPredicted RBP13.11□□□□□ -0.31
MBD1-217ENST00000588937 CRYM-AS1A6NIL9 109 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 SPDEFO95238 335 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
MBD1-217ENST00000588937 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
MBD1-217ENST00000588937 GNG3P63215 75 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 Q6ZS49 121 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 OR5M9Q8NGP3 310 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 ZNF75AQ96N20 296 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 SPACA1Q9HBV2 294 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 PFDN2Q9UHV9 154 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
MBD1-217ENST00000588937 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 ADAP1O75689 374 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 NMBP08949 121 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 PTGER4P35408 488 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 PLA2G5P39877 138 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 UCP3P55916 312 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 ATXN7L3Q14CW9 347 aaPredicted RBP13.1□□□□□ -0.31
MBD1-217ENST00000588937 DEFB109BQ30KR1 87 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 ABCA11PQ4W5N1 156 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 PDZD9Q8IXQ8 264 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 PCNPQ8WW12 178 aaKnown RBP13.1□□□□□ -0.31
MBD1-217ENST00000588937 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 DYRK2Q92630 601 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 EXTL1Q92935 676 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 ARPC5LQ9BPX5 153 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
MBD1-217ENST00000588937 RHOFQ9HBH0 211 aa13.1□□□□□ -0.31
MBD1-217ENST00000588937 hCG_1807616A0A1W2PRN6 198 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 I3L521 148 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 IFNA21P01568 189 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 LYL1P12980 280 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 ZNF14P17017 642 aaPredicted RBP13.09□□□□□ -0.31
MBD1-217ENST00000588937 WT1P19544 449 aaPredicted RBP13.09□□□□□ -0.31
MBD1-217ENST00000588937 AANATQ16613 207 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 TOR2AQ5JU69 321 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 PRSS54Q6PEW0 395 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
MBD1-217ENST00000588937 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 PKIBQ9C010 78 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
MBD1-217ENST00000588937 MTCH1Q9NZJ7 389 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms