RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PMELP40967 661 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 VEGFCP49767 419 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 RBM11P57052 281 aaKnown RBP12.56□□□□□ -0.4
NFIX-208ENST00000587260 TAS2R20P59543 309 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 IL18Q14116 193 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 MOGAT2Q3SYC2 334 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 FAM58AQ8N1B3 248 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 BOLLQ8N9W6 283 aaKnown RBP12.56□□□□□ -0.4
NFIX-208ENST00000587260 OR4M2Q8NGB6 313 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 LRRC29Q8WV35 223 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 CCL17Q92583 94 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 RASL12Q9NYN1 266 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
NFIX-208ENST00000587260 USF3Q68DE3 2245 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 APCP25054 2843 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 CYSRT1A8MQ03 144 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 SRRM5B3KS81 715 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 H3BUI4 141 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 DAOP14920 347 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 TMEM50BP56557 158 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 IL13RA2Q14627 380 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 CARTPTQ16568 116 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 OR11L1Q8NGX0 322 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 ZFAND2BQ8WV99 257 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 LURAP1Q96LR2 239 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 CCDC32Q9BV29 185 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.55□□□□□ -0.4
NFIX-208ENST00000587260 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
NFIX-208ENST00000587260 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 SOCS1O15524 211 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 MELTFP08582 738 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 IRF2P14316 349 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 EGR1P18146 543 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 COL8A2P25067 703 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 EFNA4P52798 201 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 ATP5J2P56134 94 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
NFIX-208ENST00000587260 ARL6IP1Q15041 203 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 ZNF146Q15072 292 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 MPV17LQ2QL34 196 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 HFEQ30201 348 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 SPIN3Q5JUX0 258 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 SIGIRRQ6IA17 410 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 IZUMO1Q8IYV9 350 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 DTX3Q8N9I9 347 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 C19orf18Q8NEA5 215 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 IFT22Q9H7X7 185 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 SEBOXQ9HB31 216 aaPredicted RBP12.54□□□□□ -0.4
NFIX-208ENST00000587260 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 TMEM106BQ9NUM4 274 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
NFIX-208ENST00000587260 ANKRD17O75179 2603 aaKnown RBP12.54□□□□□ -0.4
NFIX-208ENST00000587260 POLQO75417 2590 aa12.54□□□□□ -0.4
NFIX-208ENST00000587260 J3QRK9 145 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 GEMIN2O14893 280 aaKnown RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 WNT9BO14905 357 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 GSTZ1O43708 216 aaPredicted RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 SSX4O60224 188 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 ZNF205O95201 554 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 PRKACAP17612 351 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 DNASE1P24855 282 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 CD80P33681 288 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 SNU13P55769 128 aaKnown RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 TAF9Q16594 264 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 PYDC2Q56P42 97 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 FAM201AQ5SY85 155 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 GCSAMQ8N6F7 178 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 RDH5Q92781 318 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 HPS1Q92902 700 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 EMG1Q92979 244 aaKnown RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
NFIX-208ENST00000587260 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
NFIX-208ENST00000587260 LRRC30A6NM36 301 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.4
NFIX-208ENST00000587260 MFNGO00587 321 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 CA11O75493 328 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 NXPH2O95156 264 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.4
NFIX-208ENST00000587260 HIST1H1DP16402 221 aaKnown RBP12.52□□□□□ -0.4
NFIX-208ENST00000587260 GLRA1P23415 457 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 BLVRBP30043 206 aaPredicted RBP12.52□□□□□ -0.4
NFIX-208ENST00000587260 CDNFQ49AH0 187 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms